RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RNF114Q9Y508 228 aa9.02□□□□□ -0.97
NEDD8-204ENST00000526430 CLDN25C9JDP6 229 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 J3QT63 122 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 CCRL2O00421 344 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 AKR7A2O43488 359 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 GATBO75879 557 aaKnown RBP9.01□□□□□ -0.97
NEDD8-204ENST00000526430 SERPINA3P01011 423 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 OPN1MWP04001 364 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PGA5P0DJD9 388 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PPIAL4GP0DN37 164 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 OPN1MW2P0DN77 364 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 OPN1MW3P0DN78 364 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 RAB3AP20336 220 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PRKACBP22694 351 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 GADD45AP24522 165 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 FGF9P31371 208 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-204ENST00000526430 NPBWR2P48146 333 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 RBP2P50120 134 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 MTCP1P56278 107 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PROK1P58294 105 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 IL24Q13007 206 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PDZK1IP1Q13113 114 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 KISS1Q15726 138 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 SFRP4Q6FHJ7 346 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-204ENST00000526430 LYPD2Q6UXB3 125 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 NR2C2APQ86WQ0 139 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 ZNF573Q86YE8 665 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 Q8NFD4 153 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 RFT1Q96AA3 541 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 SPSB1Q96BD6 273 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 TIMD4Q96H15 378 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 TECTBQ96PL2 329 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 TMEM246Q9BRR3 403 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 PKIBQ9C010 78 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 RNF167Q9H6Y7 350 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 TCF7L1Q9HCS4 588 aa9.01□□□□□ -0.97
NEDD8-204ENST00000526430 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 A6NLC8 198 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 IFNL4K9M1U5 179 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 LGALS8O00214 317 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
NEDD8-204ENST00000526430 ANGPTL7O43827 346 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 PLATP00750 562 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 TFF1P04155 84 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 CD2P06729 351 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 SFTPBP07988 381 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 WNT2P09544 360 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 GALP22466 123 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 BDKRB2P30411 391 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 CD80P33681 288 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 ATP1B3P54709 279 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 BTG1P62324 171 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 COL10A1Q03692 680 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 MZT1Q08AG7 82 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 CNN3Q15417 329 aaKnown RBP9□□□□□ -0.97
NEDD8-204ENST00000526430 TRAM1Q15629 374 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 ZNF404Q494X3 552 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 C11orf87Q6NUJ2 197 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 LHFPL2Q6ZUX7 228 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 SLC25A26Q70HW3 274 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 FAM90A1Q86YD7 464 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 BATF2Q8N1L9 274 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 POC1AQ8NBT0 407 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 OR13F1Q8NGS4 319 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 PHYHIPQ92561 330 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 RAB1CQ92928 201 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 BORCS8Q96FH0 119 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 GAL3ST1Q99999 423 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 MRI1Q9BV20 369 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 TMEM138Q9NPI0 162 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 TXNL4BQ9NX01 149 aaKnown RBP9□□□□□ -0.97
NEDD8-204ENST00000526430 ZNF222Q9UK12 451 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 SLC7A11Q9UPY5 501 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 RYR2Q92736 4967 aa9□□□□□ -0.97
NEDD8-204ENST00000526430 IGKV1D-17A0A075B6S4 117 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 A0A1B0GW55 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 F5H0A9 414 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 MAS1P04201 325 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 CSF1P09603 554 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 CD36P16671 472 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 PSMA1P25786 263 aaKnown RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 TGFBR1P36897 503 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 SEC61A1P61619 476 aaKnown RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 C1orf100Q5SVJ3 147 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 ATPAF1Q5TC12 328 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 FIP1L1Q6UN15 594 aaKnown RBP8.99□□□□□ -0.97
NEDD8-204ENST00000526430 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 CDH26Q8IXH8 852 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 TMEM86BQ8N661 226 aa8.99□□□□□ -0.97
NEDD8-204ENST00000526430 CD177Q8N6Q3 437 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms