RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 UBTFL6P0CB48 400 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 FOXN2P32314 431 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 BMI1P35226 326 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 CXCL5P42830 114 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 SYKP43405 635 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 CDK9P50750 372 aaKnown RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 SKP1P63208 163 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 BTG2P78543 158 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OGDHQ02218 1023 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 BSPH1Q075Z2 132 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 FGL1Q08830 312 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 BST1Q10588 318 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 EIF4EBP1Q13541 118 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 IL18Q14116 193 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 NCMAPQ5T1S8 102 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 CARD17Q5XLA6 110 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 UGT2A3Q6UWM9 527 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 NUDCD3Q8IVD9 361 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OR4K2Q8NGD2 314 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OR9K2Q8NGE7 335 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OR5T3Q8NGG3 340 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OR2A1Q8NGT9 310 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 SKA2Q8WVK7 121 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 IMP4Q96G21 291 aaKnown RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 OR2A5Q96R48 311 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 BPESC1Q9GZL8 116 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 IFI27L2Q9H2X8 130 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 HAUS4Q9H6D7 363 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 XCL2Q9UBD3 114 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 KCNIP3Q9Y2W7 256 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 ARL5AQ9Y689 179 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 COMMD3-BMI1R4GMX3 469 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
CPNE3-206ENST00000523469 HERC2O95714 4834 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 STAB2Q8WWQ8 2551 aa3.48□□□□□ -1.85
CPNE3-206ENST00000523469 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 KIR2DL5BA0A0G2JN68 375 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 KIR2DL5BA0A0G2JPC4 375 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 LCE6AA0A183 80 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 SLC22A20A6NK97 555 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 H7C417 338 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 CHST10O43529 356 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 AIREO43918 545 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 FCMRO60667 390 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 TGM6O95932 706 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 C1QAP02745 245 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 ALDOBP05062 364 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 SYT1P21579 422 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 CPN2P22792 545 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 OMGP23515 440 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 NUP62P37198 522 aaPredicted RBP3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PPIDQ08752 370 aaKnown RBP3.47□□□□□ -1.85
CPNE3-206ENST00000523469 SGCAQ16586 387 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PDZK1Q5T2W1 519 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 UTS2BQ765I0 119 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 SNX20Q7Z614 316 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PIANPQ8IYJ0 282 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 OFCC1Q8IZS5 231 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 KIR2DL5AQ8N109 375 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 MUC15Q8N387 334 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 KIR2DL5BQ8NHK3 375 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PYROXD1Q8WU10 500 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 RAD51AP1Q96B01 352 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 EXOSC8Q96B26 276 aaKnown RBP3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PAIP2Q9BPZ3 127 aaKnown RBP3.47□□□□□ -1.85
CPNE3-206ENST00000523469 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 DNTTIP1Q9H147 329 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 NTN4Q9HB63 628 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 MRPL47Q9HD33 250 aaKnown RBP3.47□□□□□ -1.85
CPNE3-206ENST00000523469 NECAP2Q9NVZ3 263 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 TAC3Q9UHF0 121 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 C15orf41Q9Y2V0 281 aa3.47□□□□□ -1.85
CPNE3-206ENST00000523469 PCP4L1A6NKN8 68 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 B4DSR2 109 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 CCL22O00626 93 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 CLDN9O95484 217 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 KRT14P02533 472 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 IFNA16P05015 189 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 SLC35G6P0C7Q6 338 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 OR56A5P0C7T3 313 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 GKN3PP0CG01 181 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 OR8G3PP0DMU2 310 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 IL32P24001 234 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 PRTN3P24158 256 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 CDKN1BP46527 198 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 FABP6P51161 128 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 CDK16Q00536 496 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 REG3AQ06141 175 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 PNOCQ13519 176 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 GNMTQ14749 295 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 TMED2Q15363 201 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 RSPO1Q2MKA7 263 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 COA6Q5JTJ3 125 aaKnown RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 SPANXN2Q5MJ10 180 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 KPRPQ5T749 579 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 PRAMEF5Q5TYX0 476 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 PRAMEF6Q5VXH4 476 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 NCBP2-AS2Q69YL0 99 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms