RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 CLVS2Q5SYC1 327 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 UTF1Q5T230 341 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 C16orf89Q6UX73 402 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 FOXRED2Q8IWF2 684 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 OR8U1Q8NH10 309 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 SNX22Q96L94 193 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 CEP19Q96LK0 163 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 CMC2Q9NRP2 79 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 FAM206AQ9NX38 181 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 HHLA2Q9UM44 414 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 BAIAP2Q9UQB8 552 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 U3KQV3 271 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
SDCBP-211ENST00000523441 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
SDCBP-211ENST00000523441 BDH1Q02338 343 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 CXorf66Q5JRM2 361 aaPredicted RBP9.13□□□□□ -0.95
SDCBP-211ENST00000523441 SLX4IPQ5VYV7 408 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
SDCBP-211ENST00000523441 PLEKHG7Q6ZR37 379 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 STPG2Q8N412 459 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 DRAM1Q8N682 238 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 C5orf56Q8N8D9 126 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 BBS1Q8NFJ9 593 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 TOMM40LQ969M1 308 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 RPEQ96AT9 228 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 ISOC1Q96CN7 298 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 RNFT2Q96EX2 444 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 NSMCE2Q96MF7 247 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 OR5B12Q96R08 314 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 IL1RAPQ9NPH3 570 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 MTCH1Q9NZJ7 389 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 IKZF2Q9UKS7 526 aa9.13□□□□□ -0.95
SDCBP-211ENST00000523441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.13□□□□□ -0.95
SDCBP-211ENST00000523441 SORL1Q92673 2214 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 TRGV10A0A0A0MS01 117 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 A0A0U1RQV5 110 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 NCBP2LA6PVI3 153 aaKnown RBP9.12□□□□□ -0.95
SDCBP-211ENST00000523441 NDUFAB1O14561 156 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 MAGEB4O15481 346 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-211ENST00000523441 PSPNO60542 156 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 DHRS3O75911 302 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 SLC6A1P30531 599 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 ERVK11-1P61568 191 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 SCN1BQ07699 218 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 AESQ08117 197 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 LTC4SQ16873 150 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 HLA-DRB5Q30154 266 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 FAM27D1Q5T7N8 215 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 OR52W1Q6IF63 320 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 SLC25A26Q70HW3 274 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 OR11H1Q8NG94 326 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 GAL3ST2Q9H3Q3 398 aa9.12□□□□□ -0.95
SDCBP-211ENST00000523441 TRIM64CA6NLI5 447 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 PRR32B1ATL7 298 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 HMGB1P1B2RPK0 211 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-211ENST00000523441 JTBO76095 146 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 IGKV1D-33P01593 117 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 IGKV1-33P01594 117 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 IGLV1-47P01700 117 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 TTRP02766 147 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 HCKP08631 526 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 PRKACAP17612 351 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 GLIPR1P48060 266 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 POU3F4P49335 361 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 GNG10P50151 68 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 PRRX1P54821 245 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 P2RX3P56373 397 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 IL24Q13007 206 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 GPR50Q13585 617 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 BCL2L15Q5TBC7 163 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 FAM53AQ6NSI3 398 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-211ENST00000523441 CCDC144NLQ6NUI1 221 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 RTN4RL2Q86UN3 420 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 CPOQ8IVL8 374 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 OR4D6Q8NGJ1 314 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 RBMXL1Q96E39 390 aaKnown RBP9.11□□□□□ -0.95
SDCBP-211ENST00000523441 HRASLS5Q96KN8 279 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 MROQ9BYG7 248 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 SPAG4Q9NPE6 437 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 RBFOX1Q9NWB1 397 aaKnown RBP9.11□□□□□ -0.95
SDCBP-211ENST00000523441 ABCD2Q9UBJ2 740 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 GLS2Q9UI32 602 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 SLC7A11Q9UPY5 501 aa9.11□□□□□ -0.95
SDCBP-211ENST00000523441 UBE2J1Q9Y385 318 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-211ENST00000523441 IGKV1-27A0A075B6S5 117 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 IGHV3-72A0A0B4J1Y9 119 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 LOC110117498-PIK3R3F6TDL0 507 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 DLGAP1O14490 977 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 MGST3O14880 152 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 ARPC2O15144 300 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 SAP30O75446 220 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms