RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 COX7A1P24310 79 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 PEX2P28328 305 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 NPBWR2P48146 333 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 BMXP51813 675 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 PROK1P58294 105 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
CLN8-206ENST00000523237 SRSF4Q08170 494 aaKnown RBP13.2□□□□□ -0.3
CLN8-206ENST00000523237 PDZK1IP1Q13113 114 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 EDDM3AQ14507 147 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 ZNF146Q15072 292 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 AANATQ16613 207 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 LRRC75BQ2VPJ9 315 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 SPIN3Q5JUX0 258 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
CLN8-206ENST00000523237 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 STMN2Q93045 179 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 AJUBAQ96IF1 538 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 PPA2Q9H2U2 334 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 ISG20L2Q9H9L3 353 aaKnown RBP13.2□□□□□ -0.3
CLN8-206ENST00000523237 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
CLN8-206ENST00000523237 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 hADV38S2A0JD32 116 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 TSPAN9O75954 239 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 PRKACAP17612 351 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 GABRR1P24046 479 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 DUSP1P28562 367 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 GBX2P52951 348 aaPredicted RBP13.19□□□□□ -0.3
CLN8-206ENST00000523237 DLX6P56179 175 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 GRK1Q15835 563 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 ZSCAN26Q16670 478 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 OR13C9Q8NGT0 318 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 OR13D1Q8NGV5 346 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 HAVCR2Q8TDQ0 301 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 RDH12Q96NR8 316 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 COMMD4Q9H0A8 199 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 ZCCHC4Q9H5U6 513 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 HMG20AQ9NP66 347 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 MRPS18AQ9NVS2 196 aaKnown RBP13.19□□□□□ -0.3
CLN8-206ENST00000523237 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
CLN8-206ENST00000523237 IL36RNQ9UBH0 155 aa13.19□□□□□ -0.3
CLN8-206ENST00000523237 SH2D1BO14796 132 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 TIMM23O14925 209 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 PSPNO60542 156 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 ZFPL1O95159 310 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 IGHV1-8P0DP01 117 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
CLN8-206ENST00000523237 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 SERPINA12Q8IW75 414 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 OR52N4Q8NGI2 321 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 OR52I1Q8NGK6 324 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 OR5D14Q8NGL3 314 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 OR5AK2Q8NH90 309 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 APH1BQ8WW43 257 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 SPACA5Q96QH8 159 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 CHST6Q9GZX3 395 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 RHOFQ9HBH0 211 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 TBL2Q9Y4P3 447 aaKnown RBP13.18□□□□□ -0.3
CLN8-206ENST00000523237 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 LINC00312Q9Y6C7 94 aa13.18□□□□□ -0.3
CLN8-206ENST00000523237 MEX3AA1L020 520 aaKnown RBP13.17□□□□□ -0.3
CLN8-206ENST00000523237 M0QZ24 198 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 MGST3O14880 152 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 KDM4BO94953 1096 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 ARG1P05089 322 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 HCKP08631 526 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 CALCBP10092 127 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 LY6EQ16553 131 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 SAXO1Q8IYX7 474 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 OR5D18Q8NGL1 313 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 FOXRED1Q96CU9 486 aaPredicted RBP13.17□□□□□ -0.3
CLN8-206ENST00000523237 PDCD1LG2Q9BQ51 273 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 EXOSC4Q9NPD3 245 aaKnown RBP13.17□□□□□ -0.3
CLN8-206ENST00000523237 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
CLN8-206ENST00000523237 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 FAM90A8PA6NJQ4 464 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 E9PI62 339 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 SULT1B1O43704 296 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 ALX3O95076 343 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 PAX6P26367 422 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 ERP29P30040 261 aaKnown RBP13.16□□□□□ -0.3
CLN8-206ENST00000523237 ZNF626Q68DY1 528 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 TCF23Q7RTU1 214 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 LHFPL4Q7Z7J7 247 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 TPRX1Q8N7U7 411 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 OR4S1Q8NGB4 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms