RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 YIPF3Q9GZM5 350 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 C1orf198Q9H425 327 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 WDR76Q9H967 626 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ADGRL4Q9HBW9 690 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 NOX3Q9HBY0 568 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CENPMQ9NSP4 180 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 PLEK2Q9NYT0 353 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 DNAJC27Q9NZQ0 273 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 EIF3KQ9UBQ5 218 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CYB5R1Q9UHQ9 305 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RAB26Q9ULW5 256 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 POLR1DQ9Y2S0 133 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RPL36Q9Y3U8 105 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RNF115Q9Y4L5 304 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 LHFPL6Q9Y693 200 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 COMMD3-BMI1R4GMX3 469 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 MGAQ8IWI9 3026 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 FAM208BQ5VWN6 2430 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 IGHV2OR16-5A0A0B4J2B6 119 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 A0A0U1RQK1 487 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 IRGMA1A4Y4 181 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF320A2RRD8 509 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 C5orf49A4QMS7 147 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR6C6A6NF89 314 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OOEPA6NGQ2 149 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SHISA9B4DS77 424 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 E7EQL1 145 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF670-ZNF695F2Z2N8 137 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 J3QRE1 110 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ABCD4O14678 606 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PHYHO14832 338 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DENRO43583 198 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PRAF2O60831 178 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF254O75437 659 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 FADS2O95864 444 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 APOC1P02654 83 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 RLN1P04808 185 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL3P09001 348 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 GNAO1P09471 354 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SBK2P0C263 348 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ACSM4P0C7M7 580 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DBTP11182 482 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PSKH1P11801 424 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CCL2P13500 99 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 TUBG1P23258 451 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CALCRP30988 508 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 APLNRP35414 380 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 GLRXP35754 106 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OPRL1P41146 370 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 NAA10P41227 235 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 HTR5AP47898 357 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 FABP6P51161 128 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 HCCSP53701 268 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 UCP2P55851 309 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CXCR4P61073 352 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 GRB2P62993 217 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF85Q03923 595 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 TLE4Q04727 773 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 BSPH1Q075Z2 132 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 RAB40BQ12829 278 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 EIF2B1Q14232 305 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OPCMLQ14982 345 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 TBC1D28Q2M2D7 210 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 RSPO1Q2MKA7 263 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 LAIR2Q6ISS4 152 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DEGS2Q6QHC5 323 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ARL9Q6T311 187 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF322Q6U7Q0 402 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DRAM2Q6UX65 266 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DPY19L4Q7Z388 723 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DCXRQ7Z4W1 244 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CDC20BQ86Y33 519 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 EGFL6Q8IUX8 553 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SLC35F2Q8IXU6 374 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 C1orf174Q8IYL3 243 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 C8orf59Q8N0T1 100 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ACBD7Q8N6N7 88 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 NUP37Q8NFH4 326 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR10H4Q8NGA5 316 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR51G2Q8NGK0 314 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR52I1Q8NGK6 324 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR2T27Q8NH04 317 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CNIH3Q8TBE1 160 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ST7LQ8TDW4 575 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 RNF133Q8WVZ7 376 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 GGHQ92820 318 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SPTSSAQ969W0 71 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SLAMF6Q96DU3 332 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PIK3IP1Q96FE7 263 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 C4orf45Q96LM5 186 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 OR8B4Q96RC9 309 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 AMELYQ99218 206 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 MYCBPQ99417 103 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 CNN2Q99439 309 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF184Q99676 751 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DHRS9Q9BPW9 319 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ANKRD60Q9BZ19 345 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 BCL2L14Q9BZR8 327 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms