RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 RDH10Q8IZV5 341 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 PP6455Q8WZ26 134 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 C10orf35Q96D05 121 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 OR5M11Q96RB7 305 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 RBFOX1Q9NWB1 397 aaKnown RBP12.22□□□□□ -0.45
CSMD1-207ENST00000520451 GNG8Q9UK08 70 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 LINC00312Q9Y6C7 94 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 SESN1Q9Y6P5 492 aa12.22□□□□□ -0.45
CSMD1-207ENST00000520451 IGHV2-26A0A0B4J1V2 119 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 CYB5AP00167 134 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 FCGR1AP12314 374 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 BCL3P20749 454 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 NPBWR2P48146 333 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 RBP2P50120 134 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 ATP1B3P54709 279 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 SNU13P55769 128 aaKnown RBP12.21□□□□□ -0.45
CSMD1-207ENST00000520451 EMX1Q04741 257 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-207ENST00000520451 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 C1orf146Q5VVC0 180 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 FAM58AQ8N1B3 248 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 OR52N4Q8NGI2 321 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 OR8J1Q8NGP2 316 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 R3HDM4Q96D70 268 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 GABARAPL3Q9BY60 117 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 MMP28Q9H239 520 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
CSMD1-207ENST00000520451 NOTCH3Q9UM47 2321 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 TRBV2A0A0J9YWF9 115 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 DYNC1I1O14576 645 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 XPNPEP2O43895 674 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 PSPNO60542 156 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 ENTPD6O75354 484 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 CALCBP10092 127 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 PRKACAP17612 351 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 VDAC2P45880 294 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-207ENST00000520451 MTCP1P56278 107 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 ISL1P61371 349 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 BLCAPP62952 87 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 ZNF85Q03923 595 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 BNIP1Q12981 228 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 TMED1Q13445 227 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 TMEM95Q3KNT9 176 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 FBLN7Q53RD9 439 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 Q6ZS46 218 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 NDUFA11Q86Y39 141 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 DNAAF1Q8NEP3 725 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 OR4F17Q8NGA8 305 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-207ENST00000520451 RFKQ969G6 155 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 EME1Q96AY2 570 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 ADAT3Q96EY9 351 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-207ENST00000520451 OR4F4Q96R69 305 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 CITED2Q99967 270 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-207ENST00000520451 CLEC7AQ9BXN2 247 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 SEBOXQ9HB31 216 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-207ENST00000520451 GLS2Q9UI32 602 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 OAZ3Q9UMX2 235 aa12.2□□□□□ -0.46
CSMD1-207ENST00000520451 DSCAML1Q8TD84 2053 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 IGKV1-9A0A0C4DH69 117 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 MGST3O14880 152 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 ALDOBP05062 364 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 ZNF20P17024 532 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 ATF1P18846 271 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 PRKACBP22694 351 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 AZGP1P25311 298 aaKnown RBP12.19□□□□□ -0.46
CSMD1-207ENST00000520451 OR3A1P47881 315 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 P2RX3P56373 397 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 CDC42P60953 191 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 ZNF146Q15072 292 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 SPIN3Q5JUX0 258 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 TMEM244Q5VVB8 128 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 Q6ZPA2 131 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 ZBTB49Q6ZSB9 765 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 REC114Q7Z4M0 266 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 OR2G2Q8NGZ5 317 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 RNF166Q96A37 237 aaPredicted RBP12.19□□□□□ -0.46
CSMD1-207ENST00000520451 WNT10AQ9GZT5 417 aa12.19□□□□□ -0.46
CSMD1-207ENST00000520451 SAC3D1A6NKF1 404 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 SIRPB1O00241 398 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 PIN1P1O15428 100 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 MMP23AO75900 390 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 OCM2P0CE71 109 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 OCMP0CE72 109 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-207ENST00000520451 HTR1DP28221 377 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 IL18R1Q13478 541 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 PRAMEF5Q5TYX0 476 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 LHFPL2Q6ZUX7 228 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 UTS2BQ765I0 119 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 OR4P4Q8NGL7 312 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 RFT1Q96AA3 541 aa12.18□□□□□ -0.46
CSMD1-207ENST00000520451 FGGYQ96C11 551 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms