RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RPL27P61353 136 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 SELENOWP63302 87 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 CDK6Q00534 326 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 SPIBQ01892 262 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 TMEM177Q53S58 311 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ALG10Q5BKT4 473 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 KHDC1LQ5JSQ8 128 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ENTPD8Q5MY95 495 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ETV3LQ6ZN32 361 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 COLCA1Q6ZS62 124 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 PGAP1Q75T13 922 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 FOXRED2Q8IWF2 684 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ZNF679Q8IYX0 411 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 C8orf59Q8N0T1 100 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 GCSAMQ8N6F7 178 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 BOLLQ8N9W6 283 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 GJC3Q8NFK1 279 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 OR52H1Q8NGJ2 320 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 PIFOQ8TCI5 191 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 CD300LFQ8TDQ1 290 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 SPRYD4Q8WW59 207 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 RASSF5Q8WWW0 418 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 RORBQ92753 470 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 MYDGFQ969H8 173 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 MAL2Q969L2 176 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 POLR2J2Q9GZM3 115 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 GABARAPL1Q9H0R8 117 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 POLR2J3Q9H1A7 115 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 FAM118AQ9NWS6 357 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 C1orf123Q9NWV4 160 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 GAR1Q9NY12 217 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 SLC7A7Q9UM01 511 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ANGPT4Q9Y264 503 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 TBL2Q9Y4P3 447 aaKnown RBP3.92□□□□□ -1.78
SDCBP-207ENST00000520168 LRP12Q9Y561 859 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 SMAD5-AS1Q9Y6J3 95 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
SDCBP-207ENST00000520168 TEX13CA0A0J9YWL9 993 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 LOC100130705A0A1B0GUX0 176 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 A6NDX4 124 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 CPSF4LA6NMK7 179 aaKnown RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 XKRYO14609 159 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 BET1O15155 118 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FCN3O75636 299 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 OR7A10O76100 309 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 CCNB2O95067 398 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 RAB3DO95716 219 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 GNAO1P09471 354 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FUT1P19526 365 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 MYCNOSP40205 109 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 AQP2P41181 271 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 SLC9A3P48764 834 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 TGM4P49221 684 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 THBS3P49746 956 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 VEGFCP49767 419 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 HMGA2P52926 109 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 CXCR4P61073 352 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 LSAMPQ13449 338 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 PMS2P11Q13670 270 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 GAMTQ14353 236 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 GK2Q14410 553 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 PCK2Q16822 640 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 CNPY1Q3B7I2 92 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ZNF829Q3KNS6 432 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ZBED5Q49AG3 693 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 IFI44LQ53G44 452 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 WDR38Q5JTN6 314 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 C9orf152Q5JTZ5 239 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 C9orf66Q5T8R8 295 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 KDM4DQ6B0I6 523 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FAHD1Q6P587 224 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ADAMTSL5Q6ZMM2 481 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 MRPL21Q7Z2W9 205 aaKnown RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FAM122BQ7Z309 247 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 GPR141Q7Z602 305 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 SATL1Q86VE3 508 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 C10orf111Q8N326 155 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 PNKDQ8N490 385 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FAM86B1Q8N7N1 296 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 OR9Q1Q8NGQ5 310 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 OR52J3Q8NH60 311 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 NFKBIDQ8NI38 313 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 IL17DQ8TAD2 202 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 TSEN15Q8WW01 171 aaKnown RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 DDB2Q92466 427 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 H1FXQ92522 213 aaKnown RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 RFT1Q96AA3 541 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 MALSU1Q96EH3 234 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 SGTBQ96EQ0 304 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 RNF125Q96EQ8 232 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 OR5M11Q96RB7 305 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 MBOAT4Q96T53 435 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ASCL2Q99929 193 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 APOL4Q9BPW4 351 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ZNF649Q9BS31 505 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 YIPF3Q9GZM5 350 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms