RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 SUPT7LO94864 414 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 LYPD3O95274 346 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 C1orf105O95561 183 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TSPAN13O95857 204 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 RENP00797 406 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 RPN2P04844 631 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SNRPCP09234 159 aaKnown RBP2.31□□□□□ -2.04
CPNE3-204ENST00000517862 P0C879 139 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF43P17038 809 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 VDAC1P21796 283 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ANOS1P23352 680 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 DCKP27707 260 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 FUSP35637 526 aaKnown RBP eCLIP2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SSR1P43307 286 aaKnown RBP2.31□□□□□ -2.04
CPNE3-204ENST00000517862 CDKN1BP46527 198 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 BCAP31P51572 246 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 CLDN8P56748 225 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TPI1P60174 286 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF763Q0D2J5 394 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SCRN3Q0VDG4 424 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SELENBP1Q13228 472 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TMED1Q13445 227 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 OXA1LQ15070 435 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 MICAQ29983 383 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TMEM30BQ3MIR4 351 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SLC22A6Q4U2R8 563 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 MARC1Q5VT66 337 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 C10orf99Q6UWK7 81 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 VN1R4Q7Z5H5 301 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 LRRC49Q8IUZ0 686 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF100Q8IYN0 542 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 OTUD6BQ8N6M0 293 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TPRX1Q8N7U7 411 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 FBXL13Q8NEE6 735 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SLC26A10Q8NG04 563 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 OR52I1Q8NGK6 324 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 PLPPR1Q8TBJ4 325 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 KLHDC3Q9BQ90 382 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SYT11Q9BT88 431 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ROGDIQ9GZN7 287 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 IQCGQ9H095 443 aaKnown RBP2.31□□□□□ -2.04
CPNE3-204ENST00000517862 TUBB1Q9H4B7 451 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 REEP4Q9H6H4 257 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 AUNIPQ9H7T9 357 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 CCNB1IP1Q9NPC3 277 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 ISYNA1Q9NPH2 558 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 B3GNT2Q9NY97 397 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 CTSZQ9UBR2 303 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 COPS3Q9UNS2 423 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 SAMD4AQ9UPU9 718 aaKnown RBP2.31□□□□□ -2.04
CPNE3-204ENST00000517862 RHBDD3Q9Y3P4 386 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 LINC00854A0A1B0GVQ3 168 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF879B4DU55 563 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 E7ESA3 106 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 SLC17A2O00624 439 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 LIN7AO14910 233 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-204ENST00000517862 RAB29O14966 203 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR7A10O76100 309 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ETHE1O95571 254 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 IFNA10P01566 189 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 IFNA5P01569 189 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 GSTM3P21266 225 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ATP6V1B2P21281 511 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 PTGDSP41222 190 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 RPL29P47914 159 aaKnown RBP2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ETV1P50549 477 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ATP12AP54707 1039 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 DSCR4P56555 118 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-204ENST00000517862 RELAQ04206 551 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR5I1Q13606 314 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 SERTAD2Q14140 314 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ITIH4Q14624 930 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 GLYR1Q49A26 553 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-204ENST00000517862 VPS26BQ4G0F5 336 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 TMEM155Q4W5P6 130 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 C9orf135Q5VTT2 229 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 METTL11BQ5VVY1 283 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 FBXW9Q5XUX1 488 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 LRRC74BQ6ZQY2 392 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 Q6ZSR3 168 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 NUDCD3Q8IVD9 361 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 PRR22Q8IZ63 422 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ABHD12Q8N2K0 398 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 C6orf223Q8N319 242 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 Q8N377 158 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR7G2Q8NG99 324 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR4K14Q8NGD5 310 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR6Q1Q8NGQ2 317 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 OR5B3Q8NH48 314 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 ACMSDQ8TDX5 336 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 TCTEX1D2Q8WW35 142 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 CMTM7Q96FZ5 175 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 SLC29A1Q99808 456 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 RNF126Q9BV68 326 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 DNTTIP1Q9H147 329 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 HEXA-AS1Q9H8Q6 139 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 MTCH1Q9NZJ7 389 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 MYEF2Q9P2K5 600 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms