RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 A0A1W2PPR1 153 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 C5orf49A4QMS7 147 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ARRDC5A6NEK1 342 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 TVP23AA6NH52 213 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CYSRT1A8MQ03 144 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ATP6V1G2-DDX39BF2Z307 99 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 H0YL77 283 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 H3BNX3 289 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 DCTN6O00399 190 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SNAI2O43623 268 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PTHP01270 115 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 RAF1P04049 648 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 HMGN1P05114 100 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SERPINA5P05154 406 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 GYPBP06028 91 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CST2P09228 141 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CECR9P0C854 216 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ZNF823P16415 610 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ZNF32P17041 273 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 IGFBP5P24593 272 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 LMO1P25800 156 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FMO3P31513 532 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PYCR1P32322 319 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 APLNRP35414 380 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CFHR2P36980 270 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SOX2P48431 317 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CRISP1P54107 249 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ATP1B3P54709 279 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ESRRGP62508 458 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 NAAAQ02083 359 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 GLO1Q04760 184 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CRMP1Q14194 572 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PTGES3Q15185 160 aaKnown RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 TAF13Q15543 124 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 LRRC36Q1X8D7 754 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 TBC1D28Q2M2D7 210 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PGGHGQ32M88 737 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 KLHL12Q53G59 568 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PHLDA2Q53GA4 152 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PABPC1L2AQ5JQF8 200 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FAM27BQ5VT28 67 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 GGNBP1Q5YKI7 109 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ZNF774Q6NX45 483 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FAHD1Q6P587 224 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 UGT2A3Q6UWM9 527 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ZNF771Q7L3S4 317 aaPredicted RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 ZNF627Q7L945 461 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SSX9Q7RTT3 188 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 C5orf24Q7Z6I8 188 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 DPPA2Q7Z7J5 298 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 OR6V1Q8N148 313 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FBXL14Q8N1E6 418 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 CBR4Q8N4T8 237 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 ADAD2Q8NCV1 583 aaKnown RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 SLC30A7Q8NEW0 376 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 OR9G4Q8NGQ1 327 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 OR6K6Q8NGW6 343 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 OR2T4Q8NH00 348 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 IL17DQ8TAD2 202 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SMAP2Q8WU79 429 aaPredicted RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 NUDCD2Q8WVJ2 157 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 DNAJC9Q8WXX5 260 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 C11orf40Q8WZ69 217 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 NABP1Q96AH0 204 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 C10orf35Q96D05 121 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FBXO17Q96EF6 278 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 PLEKHF2Q9H8W4 249 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 GSN-AS1Q9NRJ2 163 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FAIMQ9NVQ4 179 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 B3GNT2Q9NY97 397 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 EIF3KQ9UBQ5 218 aaKnown RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 FBXL3Q9UKT7 428 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FZR1Q9UM11 496 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 FLVCR2Q9UPI3 526 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 LAMP3Q9UQV4 416 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 GSTK1Q9Y2Q3 226 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 UGT2A1Q9Y4X1 527 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 SIRT4Q9Y6E7 314 aaPredicted RBP2.34□□□□□ -2.04
SKP1-204ENST00000517691 NOTCH2Q04721 2471 aa2.34□□□□□ -2.04
SKP1-204ENST00000517691 LRBAP50851 2863 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ICE1Q9Y2F5 2266 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PHF3Q92576 2039 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 FBN2P35556 2912 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PPIAL4EA0A075B759 164 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 IGLV1-36A0A0B4J1U3 117 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 A0A1B0GUS0 222 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SHISA9B4DS77 424 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 E7EQL1 145 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 M0R129 80 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ZNF593O00488 134 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 EI24O14681 340 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 RRHO14718 337 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 RER1O15258 196 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SURF4O15260 269 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 HSPA12AO43301 675 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SGCEO43556 437 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SYT7O43581 403 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 MGRN1O60291 552 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 OR2J3O76001 311 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms