RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IFNGP01579 166 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 IGKV3-15P01624 115 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 IGLV1-44P01699 117 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PLA2G1BP04054 148 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 HMGN1P05114 100 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SERPINA5P05154 406 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ITGA5P08648 1049 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 NMBP08949 121 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CST2P09228 141 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 LIMS3P0CW19 117 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 LIMS4P0CW20 117 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 COX5BP10606 129 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 NAT2P11245 290 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OSMP13725 252 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 HLA-DOBP13765 273 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CBR1P16152 277 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ELK1P19419 428 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CXCL3P19876 107 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CFL1P23528 166 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SDC2P34741 201 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SELENOPP49908 381 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC25A1P53007 311 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 BIDP55957 195 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB25P57735 213 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CLRN1P58418 232 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 FXYD6P3P58550 94 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CTXN1P60606 82 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CDC42P60953 191 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 UBE2NP61088 152 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 HAMPP81172 84 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ARF1P84077 181 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 EWSR1Q01844 656 aaKnown RBP eCLIP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 GLO1Q04760 184 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MXD1Q05195 221 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ECH1Q13011 328 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MADCAM1Q13477 382 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CEACAM16Q2WEN9 425 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TEX30Q5JUR7 227 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DDI2Q5TDH0 399 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 LIPKQ5VXJ0 399 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CD276Q5ZPR3 534 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 C22orf42Q6IC83 251 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MZT2BQ6NZ67 158 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC27A4Q6P1M0 643 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DNM1P34Q6PK57 102 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC25A47Q6Q0C1 308 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ARL9Q6T311 187 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 KLHL24Q6TFL4 600 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PLET1Q6UQ28 207 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PTCHD4Q6ZW05 846 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 BCDIN3DQ7Z5W3 292 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 GLB1L2Q8IW92 636 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TIGD4Q8IY51 512 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 KDM8Q8N371 416 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC22A24Q8N4F4 322 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 IQCF1Q8N6M8 205 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 WDR31Q8NA23 367 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC37A3Q8NCC5 494 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 NOXO1Q8NFA2 376 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2T33Q8NG76 320 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR4F15Q8NGB8 312 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR8H1Q8NGG4 311 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR52L1Q8NGH7 329 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR6M1Q8NGM8 313 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR8D4Q8NGM9 314 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR9Q1Q8NGQ5 310 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR1J2Q8NGS2 313 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2T4Q8NH00 348 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR52N5Q8NH56 324 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR52J3Q8NH60 311 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MOSPD2Q8NHP6 518 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ST7LQ8TDW4 575 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PCNPQ8WW12 178 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ASB10Q8WXI3 467 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ST8SIA4Q92187 359 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 RBPMSQ93062 196 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MCHR2Q969V1 340 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF775Q96BV0 537 aaPredicted RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DIRAS2Q96HU8 199 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF582Q96NG8 517 aaPredicted RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TSPAN32Q96QS1 320 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 IL4I1Q96RQ9 567 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 FOXB1Q99853 325 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DCTN5Q9BTE1 182 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 JAM3Q9BX67 310 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 C1QTNF6Q9BXI9 259 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ULBP2Q9BZM5 246 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 OR52D1Q9H346 318 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DYNLRB1Q9NP97 96 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 EXOSC4Q9NPD3 245 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CMC2Q9NRP2 79 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CYSLTR2Q9NS75 346 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM38BQ9NVV0 291 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 CLN6Q9NWW5 311 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 IMPAD1Q9NX62 359 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PIPOXQ9P0Z9 390 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 NLKQ9UBE8 527 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms