RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 QRFPP83859 136 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CYCSP99999 105 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 PMP22Q01453 160 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SRSF5Q13243 272 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 TRA2AQ13595 282 aaKnown RBP eCLIP3.21□□□□□ -1.93e-6■■□□□ 12.9
CAST-242ENST00000515063 OR2F1Q13607 317 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 PPA1Q15181 289 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR7A5Q15622 319 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 AANATQ16613 207 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 HIST3H3Q16695 136 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 PLPPR5Q32ZL2 321 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 NKAIN1Q4KMZ8 207 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 GLYATL3Q5SZD4 288 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 DHRS7BQ6IAN0 325 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 ASPHD2Q6ICH7 369 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR7E24Q6IFN5 339 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 C3orf33Q6P1S2 294 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TMUB2Q71RG4 321 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 NDUFAF7Q7L592 441 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 DCXRQ7Z4W1 244 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 HSD17B13Q7Z5P4 300 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 CPEB2Q7Z5Q1 589 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC25A42Q86VD7 318 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZNF584Q8IVC4 421 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC25A45Q8N413 288 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC22A24Q8N4F4 322 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 C12orf45Q8N5I9 185 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 DEFB123Q8N688 67 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 BMPERQ8N8U9 685 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 FADS6Q8N9I5 356 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC38A9Q8NBW4 561 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC24A4Q8NFF2 622 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 BEST4Q8NFU0 473 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR1M1Q8NGA1 313 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR51A4Q8NGJ6 313 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR5D14Q8NGL3 314 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR5M8Q8NGP6 311 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR13C3Q8NGS6 347 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR6X1Q8NH79 312 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SUN5Q8TC36 379 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 LRRC20Q8TCA0 184 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 C11orf40Q8WZ69 217 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 NAT6Q93015 286 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SFXN2Q96NB2 322 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OXGR1Q96P68 337 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC7A5P2Q9GIP4 190 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ATG5Q9H1Y0 275 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 EXO5Q9H790 373 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 UBE2ZQ9H832 354 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 WDR54Q9H977 334 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TMEM138Q9NPI0 162 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.21□□□□□ -1.9
CAST-242ENST00000515063 FAM206AQ9NX38 181 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TAS2R4Q9NYW5 299 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 KCNN3Q9UGI6 736 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 RARRES3Q9UL19 164 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SLC22A13Q9Y226 551 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 WIF1Q9Y5W5 379 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 MRPS18BQ9Y676 258 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 UNC13CQ8NB66 2214 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SPAG17Q6Q759 2223 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 A0A0U1RQV5 110 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TMEM8BA6NDV4 472 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 DHRS7CA6NNS2 312 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 H0YC42 278 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 I3L521 148 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 SYT7O43581 403 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TRAF3IP2O43734 574 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 PRKNO60260 465 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 EIF1BO60739 113 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 SCRG1O75711 98 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CFDP00746 253 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 IGLV3-1P01715 115 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 IGHEP01854 428 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TTRP02766 147 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 RLN1P04808 185 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 FCER2P06734 321 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR4E1P0C645 316 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PGA4P0DJD7 388 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PGA3P0DJD8 388 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 FGF5P12034 268 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PAX1P15863 534 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 MGMTP16455 207 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CXCL2P19875 107 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 RAB3AP20336 220 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ZP3P21754 424 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ZBTB25P24278 435 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PTGDSP41222 190 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CXCL12P48061 93 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CX3CR1P49238 355 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 DUSP3P51452 185 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 P2RY4P51582 365 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ZNF41P51814 821 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 EFNB2P52799 333 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 SUCLG1P53597 346 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 FBXW4P57775 412 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ERVK11-1P61568 191 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 SLC35A1P78382 337 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms