RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 RIMS4Q9H426 269 aaPredicted RBP13.57□□□□□ -0.24
NUP54-214ENST00000514307 IFT22Q9H7X7 185 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 C1orf123Q9NWV4 160 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 CISD1Q9NZ45 108 aaKnown RBP13.57□□□□□ -0.24
NUP54-214ENST00000514307 KCNK7Q9Y2U2 307 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 RP1L1Q8IWN7 2480 aaPredicted RBP13.57□□□□□ -0.24
NUP54-214ENST00000514307 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 DISC1C4P0D8 188 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 E7EQL1 145 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 RHBDL1O75783 438 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 RAB3DO95716 219 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 NAT1P18440 290 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
NUP54-214ENST00000514307 IKZF1Q13422 519 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 CDSNQ15517 529 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 EFNB3Q15768 340 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 OLFML2AQ68BL7 652 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 C6orf201Q7Z4U5 140 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 FAM90A1Q86YD7 464 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 ZNF843Q8N446 348 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 OR11L1Q8NGX0 322 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 MEGF10Q96KG7 1140 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 CMSS1Q9BQ75 279 aaKnown RBP13.56□□□□□ -0.24
NUP54-214ENST00000514307 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 SEBOXQ9HB31 216 aaPredicted RBP13.56□□□□□ -0.24
NUP54-214ENST00000514307 MCUBQ9NWR8 336 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 NLKQ9UBE8 527 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 KALRNO60229 2985 aa13.56□□□□□ -0.24
NUP54-214ENST00000514307 hCG_1807616A0A1W2PRN6 198 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 H7C1Q1 480 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 M0R233 179 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 IFNA6P05013 189 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 IRF2P14316 349 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 GLRA1P23415 457 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 DTYMKP23919 212 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 GATA4P43694 442 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 OR3A3P47888 321 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 SNTB1Q13884 538 aaKnown RBP13.55□□□□□ -0.24
NUP54-214ENST00000514307 FAM209AQ5JX71 171 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 SIGIRRQ6IA17 410 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 ZNF782Q6ZMW2 699 aaPredicted RBP13.55□□□□□ -0.24
NUP54-214ENST00000514307 HOGA1Q86XE5 327 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 NUDCD2Q8WVJ2 157 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 GTF3AQ92664 365 aaKnown RBP13.55□□□□□ -0.24
NUP54-214ENST00000514307 PIK3IP1Q96FE7 263 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 ZNF488Q96MN9 340 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 OR2V2Q96R30 315 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 OCEL1Q9H607 264 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 UFSP2Q9NUQ7 469 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 SCP2D1Q9UJQ7 156 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 ELF5Q9UKW6 265 aaPredicted RBP13.55□□□□□ -0.24
NUP54-214ENST00000514307 NUBP2Q9Y5Y2 271 aa13.55□□□□□ -0.24
NUP54-214ENST00000514307 MEIS3P1A6NDR6 274 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 LRRC30A6NM36 301 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 F8VVB4 439 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 F8VWA3 439 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 IFNL4K9M1U5 179 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 SSX5O60225 188 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 DHFRP00374 187 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 KNG1P01042 644 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 IGHV1-46P01743 117 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 MT-ND4P03905 459 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 CD74P04233 296 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 CD3DP04234 171 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 CD55P08174 381 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 SPNP16150 400 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 GIFP27352 417 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 TAS2R46P59540 309 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 ZNF146Q15072 292 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 TESK1Q15569 626 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 MPPED2Q15777 294 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 SMIM21Q3B7S5 101 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 ZNF672Q499Z4 452 aaPredicted RBP13.54□□□□□ -0.24
NUP54-214ENST00000514307 PLA1AQ53H76 456 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
NUP54-214ENST00000514307 RSBN1Q5VWQ0 802 aaPredicted RBP13.54□□□□□ -0.24
NUP54-214ENST00000514307 PRAMEF6Q5VXH4 476 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 SFRP4Q6FHJ7 346 aaPredicted RBP13.54□□□□□ -0.24
NUP54-214ENST00000514307 WDR82Q6UXN9 313 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 OR4K15Q8NH41 348 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 HPS1Q92902 700 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 FBXW5Q969U6 566 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 CREB3L1Q96BA8 519 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 TMEM204Q9BSN7 226 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 HES4Q9HCC6 221 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 FAIMQ9NVQ4 179 aa13.54□□□□□ -0.24
NUP54-214ENST00000514307 FASNP49327 2511 aaKnown RBP13.54□□□□□ -0.24
NUP54-214ENST00000514307 A0A1B0GVG6 124 aa13.53□□□□□ -0.24
NUP54-214ENST00000514307 UBE2QL1A1L167 161 aa13.53□□□□□ -0.24
NUP54-214ENST00000514307 TCRBP04435 133 aa13.53□□□□□ -0.24
NUP54-214ENST00000514307 ZNF44P15621 663 aa13.53□□□□□ -0.24
NUP54-214ENST00000514307 AMY2BP19961 511 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms