RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 HTR3BO95264 441 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 KNG1P01042 644 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 WNT2P09544 360 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CLEC2LP0C7M8 214 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 JUNBP17275 347 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 SERPINA2P20848 420 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 MYL9P24844 172 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 PTGFRP43088 359 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 GZMKP49863 264 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CAV3P56539 151 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CLDN12P56749 244 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 GNB2P62879 340 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 P2RY14Q15391 338 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 PIGYQ3MUY2 71 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 SLC22A6Q4U2R8 563 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 ESCO2Q56NI9 601 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 HES5Q5TA89 166 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 OR10K2Q6IF99 312 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 GLIPR1L1Q6UWM5 242 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF788Q6ZQV5 615 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 LYPD6Q86Y78 171 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM58AQ8N1B3 248 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 NKAIN3Q8N8D7 197 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 PNLDC1Q8NA58 520 aaKnown RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNRF1Q8ND25 227 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM185AQ8NFB2 350 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 ST8SIA4Q92187 359 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 PHYHIPQ92561 330 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM46BQ96A09 425 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CPNE2Q96FN4 548 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 CLUHP3Q96NS8 147 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 SSBP3Q9BWW4 388 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 NAA50Q9GZZ1 169 aaKnown RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 SLITRK2Q9H156 845 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 HMG20AQ9NP66 347 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 MIOXQ9UGB7 285 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 GSTK1Q9Y2Q3 226 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 MAB21L2Q9Y586 359 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 TEP1Q99973 2627 aaKnown RBP8.15□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A0B4J203 849 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 MEX3AA1L020 520 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 C22orf46C9J442 243 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 SIRPB1O00241 398 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 HSPB6O14558 160 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 HAND1O96004 215 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 TGFAP01135 160 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 TFAP2AP05549 437 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 HEXAP06865 529 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 MSMBP08118 114 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 PRDX2P32119 198 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 CAPZA1P52907 286 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 COL10A1Q03692 680 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 MXD1Q05195 221 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 SCN1BQ07699 218 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 RSU1Q15404 277 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 KCNJ8Q15842 424 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 WDR25Q64LD2 544 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 CYB5R2Q6BCY4 276 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF841Q6ZN19 808 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 IL17RELQ6ZVW7 336 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 NLRC3Q7RTR2 1065 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 ASCC1Q8N9N2 400 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 LINC01356Q8N9X3 169 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 ZSCAN4Q8NAM6 433 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 PXT1Q8NFP0 134 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 OR13F1Q8NGS4 319 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 C12orf43Q96C57 262 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 C1orf147Q96MC9 270 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 CHST6Q9GZX3 395 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 BANF2Q9H503 90 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 MMP26Q9NRE1 261 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 YAE1D1Q9NRH1 226 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 CLN8Q9UBY8 286 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 SSR3Q9UNL2 185 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 TLN2Q9Y4G6 2542 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 ABCA1O95477 2261 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 MALRD1Q5VYJ5 2156 aa8.14□□□□□ -1.11
TOPBP1-209ENST00000513818 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.113e-13■■■■■ 46.7
TOPBP1-209ENST00000513818 TMEM82A0PJX8 343 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 B4DSR2 109 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 SIGLEC5O15389 551 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 CD5LO43866 347 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 AIREO43918 545 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 FSTL3O95633 263 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF44P15621 663 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 NDUFB7P17568 137 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 ALDH3B2P48448 385 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 FGF12P61328 243 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 NCS1P62166 190 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 IL13RA1P78552 427 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 PLA2G7Q13093 441 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 FOXB2Q5VYV0 432 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 GLT8D1Q68CQ7 371 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC36A1Q7Z2H8 476 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 BIVMQ86UB2 503 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 RTN4RL2Q86UN3 420 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 Q8IYB0 196 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms