RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SS18L1O75177 396 aaPredicted RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 SERPINB7O75635 380 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 AHSA1O95433 338 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 TFPTP0C1Z6 253 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 NQO1P15559 274 aaKnown RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 PPIBP23284 216 aaKnown RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 FKBP2P26885 142 aaKnown RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 RPS5P46782 204 aaKnown RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 ZNF83P51522 516 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 CDK6Q00534 326 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 FGL1Q08830 312 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SKP2Q13309 424 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 DEFB113Q30KQ7 82 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 LIN52Q52LA3 116 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 PAGE3Q5JUK9 113 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 TTC23Q5W5X9 447 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 CARD17Q5XLA6 110 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 REEP3Q6NUK4 255 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 FAM71F2Q6NXP2 309 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 C3orf33Q6P1S2 294 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 CASP12Q6UXS9 341 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ZNF836Q6ZNA1 936 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 GDPD3Q7L5L3 318 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 AAED1Q7RTV5 226 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 GRINAQ7Z429 371 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SH2D6Q7Z4S9 175 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SLC38A6Q8IZM9 456 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ASPMQ8IZT6 3477 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ARL6IP6Q8N6S5 226 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 BBS1Q8NFJ9 593 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 OR52E4Q8NGH9 312 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 PIGXQ8TBF5 258 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 MAL2Q969L2 176 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 APH1AQ96BI3 265 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 S100PBPQ96BU1 408 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 DOCK10Q96BY6 2186 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SEC22AQ96IW7 307 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ARL5BQ96KC2 179 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 RBM14Q96PK6 669 aaKnown RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 ZNF184Q99676 751 aaPredicted RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 CCL19Q99731 98 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 GAL3ST1Q99999 423 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 KCNS3Q9BQ31 491 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ECSITQ9BQ95 431 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 CHIAQ9BZP6 476 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 FAM107BQ9H098 131 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SLC38A1Q9H2H9 487 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 TREM2Q9NZC2 230 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 EMC3Q9P0I2 261 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 CHRNA9Q9UGM1 479 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 RIMS3Q9UJD0 308 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ZNF221Q9UK13 617 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
HTT-210ENST00000512909 NDUFAF1Q9Y375 327 aa3.06□□□□□ -1.92
HTT-210ENST00000512909 SHANK1Q9Y566 2161 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 TENM4Q6N022 2769 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 A0A1W2PP18 115 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 PRORSD1PA6NEY8 169 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 CPSF4LA6NMK7 179 aaKnown RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 ABCD4O14678 606 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 AIM2O14862 343 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 RS1O15537 224 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 PRKYO43930 277 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 TPST1O60507 370 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 EIF1BO60739 113 aaKnown RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 MMP23AO75900 390 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 CA1P00915 261 aaPredicted RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 OPN1SWP03999 348 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 SEMG1P04279 462 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 P0C879 139 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 ZNF43P17038 809 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 GGT1P19440 569 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 CRYGSP22914 178 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 ELK4P28324 431 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 AGTR1P30556 359 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 FABP6P51161 128 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 DAP3P51398 398 aaKnown RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 PRKXP51817 358 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 ATP5J2P56134 94 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 RGS8P57771 180 aaPredicted RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 MTPNP58546 118 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 UBE2NP61088 152 aaKnown RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 TGFBR3Q03167 851 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 PMS2P3Q13401 168 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 FBXL19-AS1Q494R0 122 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 RNF212Q495C1 297 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 BEX5Q5H9J7 111 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 C1orf140Q5VVS0 124 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 FBXW9Q5XUX1 488 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 TTC33Q6PID6 262 aaPredicted RBP3.05□□□□□ -1.92
HTT-210ENST00000512909 DHDDSQ86SQ9 333 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 FUNDC1Q8IVP5 155 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 KIR3DL3Q8N743 410 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 OR10A6Q8NH74 314 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 RNF138Q8WVD3 245 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 GTF2H4Q92759 462 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 HAVCR1Q96D42 359 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 TPD52L3Q96J77 140 aa3.05□□□□□ -1.92
HTT-210ENST00000512909 CLCC1Q96S66 551 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms