RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RTTNQ86VV8 2226 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TRBV24-1A0A075B6N3 115 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 A0A0J9YX75 114 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 A0A1B0GTI1 187 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 KBTBD11-OT1A0A1B0GTJ5 212 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 LOC389332A0A1B0GUA5 103 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 VPS37CA5D8V6 355 aaPredicted RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SLC22A20A6NK97 555 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 PLPP3O14495 311 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TRDMT1O14717 391 aaKnown RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 XRCC2O43543 280 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 COX7A2P2O60397 106 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SH2D1AO60880 128 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 GPR75O95800 540 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ERCC1P07992 297 aaPredicted RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 GUSBP08236 651 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SCGB1C2P0DMR2 95 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 CD9P21926 228 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 HTR2CP28335 458 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 CRABP1P29762 137 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 G6PCP35575 357 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 MAGEA12P43365 314 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 CASP8Q14790 479 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 PTPRKQ15262 1439 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 RPEL1Q2QD12 228 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TTC32Q5I0X7 151 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ARMC12Q5T9G4 340 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 CARD17Q5XLA6 110 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 LRRC66Q68CR7 880 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 EIF3MQ7L2H7 374 aaKnown RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TAS2R42Q7RTR8 314 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 RBM45Q8IUH3 476 aaKnown RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 GABRG1Q8N1C3 465 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SLC25A45Q8N413 288 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 OR8A1Q8NGG7 326 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 OR4C16Q8NGL9 310 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ITFG1Q8TB96 612 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SCGB1C1Q8TD33 95 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 C10orf105Q8TEF2 133 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 MAL2Q969L2 176 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 HIST1H2BAQ96A08 127 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ADTRPQ96IZ2 230 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SPACA5Q96QH8 159 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TGS1Q96RS0 853 aaKnown RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 METTL26Q96S19 204 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ANAPC13Q9BS18 74 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TSSK6Q9BXA6 273 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ULBP1Q9BZM6 244 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SLC19A3Q9BZV2 496 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF436Q9C0F3 470 aaPredicted RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 NAA50Q9GZZ1 169 aaKnown RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ASB7Q9H672 318 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 TMEM185BQ9H7F4 350 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 ZC4H2Q9NQZ6 224 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 C20orf96Q9NUD7 363 aaPredicted RBP0.17□□□□□ -2.38
PDGFC-208ENST00000512711 GCNT4Q9P109 453 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 EXTL2Q9UBQ6 330 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 SLC23A2Q9UGH3 650 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 CYB5R1Q9UHQ9 305 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 VPREB3Q9UKI3 123 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 URGCP-MRPS24S4R325 110 aa0.17□□□□□ -2.38
PDGFC-208ENST00000512711 FREM1Q5H8C1 2179 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 A0A0G2JQZ4 141 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR5H14A6NHG9 310 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 HACD1B0YJ81 288 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 DFFAO00273 331 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 CPLX1O14810 134 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 RNF113AO15541 343 aaKnown RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PLEKHA8P1O95397 391 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 AGTP01019 485 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PDYNP01213 254 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GCGP01275 180 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 HLA-AP01891 365 aaKnown RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 KRT14P02533 472 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GYPCP04921 128 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 SOD3P08294 240 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TACSTD2P09758 323 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 UBCP0CG48 685 aaKnown RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GFAPP14136 432 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GABRA1P14867 456 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 HTR2BP41595 481 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GPR1P46091 355 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GABRA4P48169 554 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 HINT1P49773 126 aaPredicted RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 RAB25P57735 213 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR2B6P58173 313 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 ATP6V0D1P61421 351 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 RPL18AQ02543 176 aaKnown RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 DOC2AQ14183 400 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GPR176Q14439 515 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 CEP55Q53EZ4 464 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 LGALS9CQ6DKI2 356 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 LAIR2Q6ISS4 152 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 VN1R4Q7Z5H5 301 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 SCD5Q86SK9 330 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 LUZP2Q86TE4 346 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TRAM1L1Q8N609 369 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR4C5Q8NGB2 326 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR11G2Q8NGC1 345 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR10P1Q8NGE3 313 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms