RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	COX10	Q12887	443 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	CRMP1	Q14194	572 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	SPATA46	Q5T0L3	261 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	FAHD1	Q6P587	224 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	DNM1P46	Q6ZS02	220 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	GPR141	Q7Z602	305 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	LRP11	Q86VZ4	500 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	ZNF101	Q8IZC7	436 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	ZNF525	Q8N782	197 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	CYB561A3	Q8NBI2	242 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	SLC26A10	Q8NG04	563 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	OR9Q1	Q8NGQ5	310 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	OR5K1	Q8NHB7	308 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	DNAJC9	Q8WXX5	260 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	NRBF2	Q96F24	287 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	DUS3L	Q96G46	650 aa	Known RBP	4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	PKP2	Q99959	881 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	CABLES2	Q9BTV7	478 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	BCL2L14	Q9BZR8	327 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	GABARAPL1	Q9H0R8	117 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	CMC2	Q9NRP2	79 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	MRPL22	Q9NWU5	206 aa	Known RBP	4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	PLEK2	Q9NYT0	353 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	MYEF2	Q9P2K5	600 aa	Known RBP	4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	EIF3K	Q9UBQ5	218 aa	Known RBP	4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	ATPIF1	Q9UII2	106 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	KLHL21	Q9UJP4	597 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	AP4S1	Q9Y587	144 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	LHFPL6	Q9Y693	200 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	POMT1	Q9Y6A1	747 aa		4.27	□□□□□ -1.73
MATR3-218	ENST00000511978	AKAP6	Q13023	2319 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CCDC168	Q8NDH2	2452 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	IGLV3-9	A0A075B6K5	115 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	TMEM129	A0AVI4	362 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	OR6C6	A6NF89	314 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	TVP23A	A6NH52	213 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	FAM183A	A6NL82	134 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978		G3V2T6	193 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SURF4	O15260	269 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SAP30	O75446	220 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	GYPB	P06028	91 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ERCC1	P07992	297 aa	Predicted RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ADRA2A	P08913	450 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CLU	P10909	449 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PSKH1	P11801	424 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ZNF250	P15622	560 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SPI1	P17947	270 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PAICS	P22234	425 aa	Known RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	IGFBP5	P24593	272 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	GGT2	P36268	569 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	RPS27	P42677	84 aa	Known RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ALDH3B1	P43353	468 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	DAP	P51397	102 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SLC25A1	P53007	311 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	UCP2	P55851	309 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	KLF3	P57682	345 aa	Predicted RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ACTR3	P61158	418 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PPP1CB	P62140	327 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	GINS1	Q14691	196 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ALKBH6	Q3KRA9	238 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CCDC92	Q53HC0	331 aa	Predicted RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	TMEM255A	Q5JRV8	349 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SLC27A4	Q6P1M0	643 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CLEC2A	Q6UVW9	174 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PET117	Q6UWS5	81 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	HIPK1	Q86Z02	1210 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PARP8	Q8N3A8	854 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PRSS35	Q8N3Z0	413 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	OR51L1	Q8NGJ5	315 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	OR6K6	Q8NGW6	343 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	OR1F12	Q8NHA8	337 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SYNPR	Q8TBG9	265 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PYDC1	Q8WXC3	89 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SLC7A6	Q92536	515 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	GTF3A	Q92664	365 aa	Known RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	TAF15	Q92804	592 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CORO2A	Q92828	525 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	PLEKHA8	Q96JA3	519 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	NEDD4L	Q96PU5	975 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	DOK1	Q99704	481 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	COQ7	Q99807	217 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	ATF6B	Q99941	703 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	VGLL1	Q99990	258 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	RBM4B	Q9BQ04	359 aa	Known RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	HCAR1	Q9BXC0	346 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	NMNAT2	Q9BZQ4	307 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	OR2J1	Q9GZK6	312 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	HDHD2	Q9H0R4	259 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	RAB1B	Q9H0U4	201 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	TPK1	Q9H3S4	243 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	WDR76	Q9H967	626 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SLC25A19	Q9HC21	320 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CYB5R1	Q9UHQ9	305 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	COMMD3-BMI1	R4GMX3	469 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	CAD	P27708	2225 aa		4.26	□□□□□ -1.73
MATR3-218	ENST00000511978	SPG11	Q96JI7	2443 aa		4.25	□□□□□ -1.73
MATR3-218	ENST00000511978	TRAV18	A0A075B6X5	111 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms