RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RPL5P46777 297 aaKnown RBP13.17□□□□□ -0.3
LMNA-222ENST00000508500 BMXP51813 675 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 COL10A1Q03692 680 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 MIDNQ504T8 468 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 BPIFB6Q8NFQ5 453 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 OR5R1Q8NH85 324 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 PIFOQ8TCI5 191 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 PPA2Q9H2U2 334 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 MRPS18AQ9NVS2 196 aaKnown RBP13.17□□□□□ -0.3
LMNA-222ENST00000508500 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 PSORS1C1Q9UIG5 152 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.17□□□□□ -0.3
LMNA-222ENST00000508500 MEX3AA1L020 520 aaKnown RBP13.16□□□□□ -0.3
LMNA-222ENST00000508500 C17orf98A8MV24 154 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 INMTO95050 263 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 NANOS3P60323 173 aaKnown RBP13.16□□□□□ -0.3
LMNA-222ENST00000508500 LY6EQ16553 131 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 TCF23Q7RTU1 214 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 PRSS48Q7RTY5 328 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 LHFPL4Q7Z7J7 247 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 SVOPQ8N4V2 548 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 SLAMF9Q96A28 289 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 FAM234AQ9H0X4 552 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 IL36RNQ9UBH0 155 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 AASSQ9UDR5 926 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 SIGLEC9Q9Y336 463 aa13.16□□□□□ -0.3
LMNA-222ENST00000508500 IGKV1-9A0A0C4DH69 117 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 LOC107986453A0A1B0GWG9 222 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 TMEM82A0PJX8 343 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 BTBD17A6NE02 478 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 RGS10O43665 173 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 ENTPD6O75354 484 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 JUNBP17275 347 aaPredicted RBP13.15□□□□□ -0.3
LMNA-222ENST00000508500 FUT6P51993 359 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 RNLSQ5VYX0 342 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
LMNA-222ENST00000508500 RNF144BQ7Z419 303 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
LMNA-222ENST00000508500 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 GNG8Q9UK08 70 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 SLC7A11Q9UPY5 501 aa13.15□□□□□ -0.3
LMNA-222ENST00000508500 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 TIMM23O14925 209 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 CHST1O43916 411 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 TSPAN15O95858 294 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 COX7A1P24310 79 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 NPBWR2P48146 333 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 SLC25A26Q70HW3 274 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 OR2G2Q8NGZ5 317 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 CEP19Q96LK0 163 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 HEXA-AS1Q9H8Q6 139 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 PLEKHA1Q9HB21 404 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 TCF7L1Q9HCS4 588 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 FRRS1LQ9P0K9 344 aa13.14□□□□□ -0.31
LMNA-222ENST00000508500 A0A0G2JK05 382 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 M0QZ24 198 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 XPNPEP2O43895 674 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 IGHA1P01876 353 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 TFAP2AP05549 437 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 CDK1P06493 297 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 CHRM2P08172 466 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 OR12D2P58182 307 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 RAB40BQ12829 278 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 AANATQ16613 207 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 ASCC1Q8N9N2 400 aaKnown RBP13.13□□□□□ -0.31
LMNA-222ENST00000508500 CCDC54Q8NEL0 328 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 GGHQ92820 318 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 RNFT2Q96EX2 444 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 MMP27Q9H306 513 aa13.13□□□□□ -0.31
LMNA-222ENST00000508500 A0A1W2PPH5 198 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 A6NHS1 94 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 ODF3BA8MYP8 253 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 PTGES3LE9PB15 166 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 UBCP0CG48 685 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 CALCBP10092 127 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 RAB13P51153 203 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 EFNB2P52799 333 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 CCBE1Q6UXH8 406 aaPredicted RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 STX19Q8N4C7 294 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms