RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 DOT1LQ8TEK3 1739 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 IFITM10A6NMD0 228 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 TRDCB7Z8K6 153 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 UBE2CO00762 179 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 DHHO43323 396 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 RNF224P0DH78 156 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 HTR1DP28221 377 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 LIMS1P48059 325 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 PGFP49763 221 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 EDDM3BP56851 147 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 ERVFRD-1P60508 538 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SIGLEC14Q08ET2 396 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 C17orf78Q8N4C9 275 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 NPEPL1Q8NDH3 523 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 PTPMT1Q8WUK0 201 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 GALMQ96C23 342 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 MYOZ1Q9NP98 299 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 STARD10Q9Y365 291 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 WIPI2Q9Y4P8 454 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 EFSO43281 561 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 PIAS2O75928 621 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 OR3A4PP47883 348 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 H2BFSP57053 126 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 Q1RN00 199 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SPNS3Q6ZMD2 512 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 HOGA1Q86XE5 327 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 WDFY1Q8IWB7 410 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 Q8IYB0 196 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 OR5D13Q8NGL4 314 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 OR5R1Q8NH85 324 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SH2D2AQ9NP31 389 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SH3BGRL2Q9UJC5 107 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 A0A1B0GU03 582 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 LOC390937A0A1W2PQ73 354 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 NKX6-3A6NJ46 265 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 SPRY1O43609 319 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 CHST1O43916 411 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 APCSP02743 223 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 NDUFB7P17568 137 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 BCL3P20749 454 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 DCDP81605 110 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 MRPL58Q14197 206 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.5□□□□□ -1.372e-6■■■■□ 20.8
UBE2D3-224ENST00000508474 C6orf201Q7Z4U5 140 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 C12orf76Q8N812 135 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 OR8G5Q8NG78 346 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 OR10V1Q8NGI7 309 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 CDC42EP3Q9UKI2 254 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 ZNF835Q9Y2P0 537 aa6.5□□□□□ -1.37
UBE2D3-224ENST00000508474 ZFC3H1O60293 1989 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 LOC102724200A0A096LPH7 203 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 A0A1B0GTH9 108 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 A0A1B0GX78 115 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 SIRPB1O00241 398 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FAM87AP0C7U9 286 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 GJA4P35212 333 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 LPAR6P43657 344 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 OR10G3Q8NGC4 313 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 MVB12AQ96EY5 273 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 POM121L2Q96KW2 1035 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 GINS3Q9BRX5 216 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 COMMD5Q9GZQ3 224 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 CISD1Q9NZ45 108 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 PIAS3Q9Y6X2 628 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 ISLRO14498 428 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 DANCRP0C864 163 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 HKR1P10072 659 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FABP2P12104 132 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FOLR2P14207 255 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FSTP19883 344 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 CHRNB4P30926 498 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 HINT1P49773 126 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FAM53BQ14153 422 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 DEFB133Q30KQ1 61 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 NKAIN1Q4KMZ8 207 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 PRAMEF20Q5VT98 475 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 C9orf135Q5VTT2 229 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 ZNF793Q6ZN11 406 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 SRD5A3Q9H8P0 318 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 KLK13Q9UKR3 277 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 SIRT4Q9Y6E7 314 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 DLEC1Q9Y238 1755 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 TRAV8-7A0A075B6U6 113 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 SLC22A20A6NK97 555 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 SPINK4O60575 86 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 HAND1O96004 215 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 CD74P04233 296 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 HIST1H1BP16401 226 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 IER3P46695 156 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 ARSJQ5FYB0 599 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 TBC1D26Q86UD7 250 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 LRFN3Q9BTN0 628 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 NRSN2Q9GZP1 204 aa6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 UBE2ZQ9H832 354 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-224ENST00000508474 FOXJ2Q9P0K8 574 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms