RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MEF2CQ06413 473 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF146Q15072 292 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 FAM189A2Q15884 450 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 SSX2Q16385 188 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 UTS2BQ765I0 119 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 TMEM219Q86XT9 240 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 EGFL6Q8IUX8 553 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 Q8N2B8 174 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 MALSU1Q96EH3 234 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 MBOAT4Q96T53 435 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 NKX3-1Q99801 234 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 CDCA4Q9BXL8 241 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 SEBOXQ9HB31 216 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 SERTAD4Q9NUC0 356 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 IMPAD1Q9NX62 359 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 FRRS1LQ9P0K9 344 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 LINC00312Q9Y6C7 94 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 A0A0G2JK05 382 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 hADV38S2A0JD32 116 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 EI24O14681 340 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 SLC16A6O15403 523 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ENTPD6O75354 484 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 CIB2O75838 187 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OPN1MWP04001 364 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ISG15P05161 165 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OPN1MW2P0DN77 364 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OPN1MW3P0DN78 364 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 JUNBP17275 347 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 GABRR1P24046 479 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 AZGP1P25311 298 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 DUSP1P28562 367 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OR3A1P47881 315 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ATP1B3P54709 279 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ACTA2P62736 377 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ACTG2P63267 376 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ACTC1P68032 377 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ACTA1P68133 377 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 GRK1Q15835 563 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 SLC25A30Q5SVS4 291 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 TMEM244Q5VVB8 128 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 FDX2Q6P4F2 183 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ENTHD1Q8IYW4 607 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OR4S1Q8NGB4 309 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OR10AC1Q8NH08 325 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 RPS4Y2Q8TD47 263 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 WIPF2Q8TF74 440 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 TRUB1Q8WWH5 349 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 PYDC1Q8WXC3 89 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 FGGYQ96C11 551 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 OPALINQ96PE5 141 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 ABCB10Q9NRK6 738 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 SESN1Q9Y6P5 492 aa10.48□□□□□ -0.73
HMGCS1-205ENST00000508319 IGHV2-26A0A0B4J1V2 119 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 IGKV1-12A0A0C4DH73 117 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 IGKV1D-12P01611 117 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 CALCBP10092 127 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF20P17024 532 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 PRKACAP17612 351 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 ATF1P18846 271 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 PEX2P28328 305 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 DYNLT3P51808 116 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 SNU13P55769 128 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 MTCP1P56278 107 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 OR12D2P58182 307 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 SNRPGP62308 76 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 DYNC1I2Q13409 638 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 SPIN3Q5JUX0 258 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 LHFPL2Q6ZUX7 228 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF676Q8N7Q3 588 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 OR51A4Q8NGJ6 313 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 SPSB1Q96BD6 273 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 RNFT2Q96EX2 444 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 TMEM133Q9H2Q1 129 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
HMGCS1-205ENST00000508319 DAPL1A0PJW8 107 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 OR4C45A6NMZ5 311 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 G3V4G9 280 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 H3BNX3 289 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 SIRPB1O00241 398 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 MGST3O14880 152 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 FBXO24O75426 580 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 MMP23AO75900 390 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 PRKACBP22694 351 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 ERP29P30040 261 aaKnown RBP10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 CCR9P51686 369 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 P2RX3P56373 397 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 PDZK1IP1Q13113 114 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 BEAN1Q3B7T3 259 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 MINOS1Q5TGZ0 78 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 MEDAGQ5VYS4 303 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 RNF144BQ7Z419 303 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 KCTD20Q7Z5Y7 419 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 DTX3Q8N9I9 347 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms