RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 OR5M11Q96RB7 305 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 CITED2Q99967 270 aaPredicted RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 RBFOX1Q9NWB1 397 aaKnown RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 GNG8Q9UK08 70 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 HILPDAQ9Y5L2 63 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 SESN1Q9Y6P5 492 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 PSPNO60542 156 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 PEX14O75381 377 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 SERPINA3P01011 423 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 UBCP0CG48 685 aaKnown RBP9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 CALCBP10092 127 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 BCL3P20749 454 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 PEX2P28328 305 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 DUSP1P28562 367 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 NPBWR2P48146 333 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 RBP2P50120 134 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 ISL1P61371 349 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF85Q03923 595 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 EMX1Q04741 257 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 SLC34A1Q06495 639 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 TMEM95Q3KNT9 176 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 FBLN7Q53RD9 439 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 Q6ZPA2 131 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 FAM220AQ7Z4H9 259 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 Q8IYB0 196 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 ENTHD1Q8IYW4 607 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 RDH10Q8IZV5 341 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 DNAAF1Q8NEP3 725 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 NDNFQ8TB73 568 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 EME1Q96AY2 570 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 C10orf35Q96D05 121 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 R3HDM4Q96D70 268 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 GABARAPL3Q9BY60 117 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 WNT10AQ9GZT5 417 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 LINC00312Q9Y6C7 94 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
HMGCS1-204ENST00000507293 IGKV1-9A0A0C4DH69 117 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 MGST3O14880 152 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 PIN1P1O15428 100 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 XPNPEP2O43895 674 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 ENTPD6O75354 484 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 CYB5AP00167 134 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 PRKACAP17612 351 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 AZGP1P25311 298 aaKnown RBP9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 OR3A1P47881 315 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 ATP1B3P54709 279 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 BLCAPP62952 87 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 TMED1Q13445 227 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 KIAA2026Q5HYC2 2103 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 C1orf146Q5VVC0 180 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 REC114Q7Z4M0 266 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 FAM58AQ8N1B3 248 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 OR4F17Q8NGA8 305 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 OR8J1Q8NGP2 316 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 PP6455Q8WZ26 134 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 OR4F4Q96R69 305 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 SEBOXQ9HB31 216 aaPredicted RBP9.27□□□□□ -0.93
HMGCS1-204ENST00000507293 SAC3D1A6NKF1 404 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 SIRPB1O00241 398 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 MMP23AO75900 390 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 ALDOBP05062 364 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 FCGR1AP12314 374 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF20P17024 532 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 ATF1P18846 271 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 PRKACBP22694 351 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 MTCP1P56278 107 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 P2RX3P56373 397 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 BNIP1Q12981 228 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF146Q15072 292 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 PRAMEF5Q5TYX0 476 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 TMEM244Q5VVB8 128 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 BAIAP2L2Q6UXY1 529 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 ZBTB49Q6ZSB9 765 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 OR4P4Q8NGL7 312 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 OR2G2Q8NGZ5 317 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 MRAPQ8TCY5 172 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 RFKQ969G6 155 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 RFT1Q96AA3 541 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 FGGYQ96C11 551 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 GLS2Q9UI32 602 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 OAZ3Q9UMX2 235 aa9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 UBE2J1Q9Y385 318 aaPredicted RBP9.26□□□□□ -0.93
HMGCS1-204ENST00000507293 IGKV1-12A0A0C4DH73 117 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 FAM172BPA6NC97 362 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 FAM90A22PA8MWA6 464 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms