RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MRPL37Q9BZE1 423 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 FBRSQ9HAH7 460 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 NXT1Q9UKK6 140 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 CYP8B1Q9UNU6 501 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 A0A087WZY1 265 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 EPOPA6NHQ4 379 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF732B4DXR9 585 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 GLI4P10075 376 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 HOXB2P14652 356 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 PHLDA2Q53GA4 152 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF664Q8N3J9 261 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 OR13H1Q8NG92 308 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 OR5L1Q8NGL2 311 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 ST8SIA1Q92185 356 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 LYZL4Q96KX0 146 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 Q96M66 194 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 SYT3Q9BQG1 590 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 TRBV24-1A0A075B6N3 115 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 A0A1W2PNV4 684 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 C5orf63A6NC05 138 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 ZNF850A8MQ14 1090 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 LINC01565O15544 149 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 HSPA12AO43301 675 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 ZNF205O95201 554 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 EFNA3P52797 238 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 RRADP55042 308 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 TFF2Q03403 129 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 TCEAL6Q6IPX3 200 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 TMEM183AQ8IXX5 376 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 ANGPTL4Q9BY76 406 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 ACTR3CQ9C0K3 210 aaPredicted RBP14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 CDH20Q9HBT6 801 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 MYO9BQ13459 2157 aa14.89□□□□□ -0.03
SQSTM1-211ENST00000506690 LIPT2A6NK58 231 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 CLDN34H7C241 214 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 SNRPCP09234 159 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 FCGR2AP12318 317 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 FUT3P21217 361 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 ZNF283Q8N7M2 679 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 ZNF441Q8N8Z8 693 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 HAS2Q92819 552 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 RBM14Q96PK6 669 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 A0A1B0GU03 582 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 PGA3P0DJD8 388 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 CLRN1P58418 232 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 FXYD4P59646 89 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 RPL23AP62750 156 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 USF2Q15853 346 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 SLC35G3Q8N808 338 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 NOXO1Q8NFA2 376 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 OR6X1Q8NH79 312 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 PLEKHF2Q9H8W4 249 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 ELL3Q9HB65 397 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 ALKBH4Q9NXW9 302 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 WASF3Q9UPY6 502 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 TRANK1O15050 2925 aa14.88□□□□□ -0.03
SQSTM1-211ENST00000506690 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 ANKUB1A6NFN9 424 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 CYB5R3P00387 301 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 DTYMKP23919 212 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 AKT2P31751 481 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 OPRM1P35372 400 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 CD200P41217 278 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 PNRC1Q12796 327 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 FOXF1Q12946 379 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 TMEM31Q5JXX7 168 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 FAM90A2PQ658T7 463 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 ABLIM2Q6H8Q1 611 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 DDIT4LQ96D03 193 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 GNPNAT1Q96EK6 184 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 FAAP24Q9BTP7 215 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 DKKL1Q9UK85 242 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 B3GALT1Q9Y5Z6 326 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 ATG2AQ2TAZ0 1938 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 LOC102723971A0A1B0GUV8 181 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 CDS2O95674 445 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 FOLR1P15328 257 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 TAF9Q16594 264 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 OR11L1Q8NGX0 322 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 GPR87Q9BY21 358 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 LYRM2Q9NU23 88 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 SLC7A11Q9UPY5 501 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 MTCH2Q9Y6C9 303 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 V9GYS6 101 aa14.87□□□□□ -0.03
SQSTM1-211ENST00000506690 PHF1O43189 567 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 HBE1P02100 147 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 AMBPP02760 352 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 CEACAM1P13688 526 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 NOVA1P51513 510 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 GRB2P62993 217 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 H3F3AP84243 136 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 SLC25A47Q6Q0C1 308 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 TMEM252Q8N6L7 170 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 OR5C1Q8NGR4 320 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 PP6455Q8WZ26 134 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 CDCA3Q99618 268 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 CALHM2Q9HA72 323 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 GLRX2Q9NS18 164 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms