RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HEXA-AS1Q9H8Q6 139 aa7.38□□□□□ -1.23
PDLIM5-209ENST00000506632 INPP5EQ9NRR6 644 aa7.38□□□□□ -1.23
PDLIM5-209ENST00000506632 FAM118AQ9NWS6 357 aa7.38□□□□□ -1.23
PDLIM5-209ENST00000506632 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
PDLIM5-209ENST00000506632 HHLA2Q9UM44 414 aa7.38□□□□□ -1.23
PDLIM5-209ENST00000506632 IGKV1-12A0A0C4DH73 117 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 LOC100130705A0A1B0GUX0 176 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 hCG_1809904A0A1W2PP81 198 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 A0A1W2PPE2 198 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 A0A1W2PR64 198 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 A0A1W2PRV1 198 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 MEGF11A6BM72 1044 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 BTBD17A6NE02 478 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 FAM90A8PA6NJQ4 464 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 ALX3O95076 343 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 FADS2O95864 444 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 PAHP00439 452 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 IGKV1D-12P01611 117 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 PIPP12273 146 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF20P17024 532 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 BCL3P20749 454 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 TGFBR2P37173 567 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 NPBWR2P48146 333 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 POU3F4P49335 361 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 BMXP51813 675 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 MTCP1P56278 107 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 ERVFRD-1P60508 538 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 MEF2CQ06413 473 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 RAB40BQ12829 278 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 PDZK1IP1Q13113 114 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 LPCAT4Q643R3 524 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 LHFPL2Q6ZUX7 228 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 RNF144BQ7Z419 303 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 LHFPL3Q86UP9 236 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 FAM58AQ8N1B3 248 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 OR52N4Q8NGI2 321 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 EMG1Q92979 244 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 MRPL48Q96GC5 212 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 RDH12Q96NR8 316 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 OPALINQ96PE5 141 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 JAM3Q9BX67 310 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 ISG20L2Q9H9L3 353 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 AMBNQ9NP70 447 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 RBFOX1Q9NWB1 397 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
PDLIM5-209ENST00000506632 TMEM212A6NML5 194 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 VGLL3A8MV65 326 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 E9PI62 339 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 H3BUX3 64 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 PSPNO60542 156 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 WBP4O75554 376 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 KDM4BO94953 1096 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 ZFPL1O95159 310 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 HAND1O96004 215 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF728P0DKX0 622 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 MRPL28Q13084 256 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 LRRC75BQ2VPJ9 315 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 SPIN3Q5JUX0 258 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF626Q68DY1 528 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 DHRS7BQ6IAN0 325 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF782Q6ZMW2 699 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 GDPD3Q7L5L3 318 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 SAXO1Q8IYX7 474 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 PARP16Q8N5Y8 322 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF676Q8N7Q3 588 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 OR11H6Q8NGC7 330 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 OR52I1Q8NGK6 324 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 OR13C9Q8NGT0 318 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 PIFOQ8TCI5 191 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 RPS4Y2Q8TD47 263 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 MYCBPQ99417 103 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 SSX3Q99909 188 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 COMMD4Q9H0A8 199 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 HMG20AQ9NP66 347 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 FGF20Q9NP95 211 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 RPL36Q9Y3U8 105 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 LINC00312Q9Y6C7 94 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 VWFP04275 2813 aa7.36□□□□□ -1.23
PDLIM5-209ENST00000506632 INMTO95050 263 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 CYB5AP00167 134 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 RPSAP08865 295 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 CCDC159P0C7I6 412 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 IGHV1-8P0DP01 117 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 PRKACAP17612 351 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 COX7A1P24310 79 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 LMO1P25800 156 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 PAX6P26367 422 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 PEX2P28328 305 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 DUSP1P28562 367 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ERP29P30040 261 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 OR3A1P47881 315 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 EDDM3BP56851 147 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ZP1P60852 638 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 GRK1Q15835 563 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms