RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 CHATP28329 748 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 DVL1P1P54792 670 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 PLA2G7Q13093 441 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 P2RY14Q15391 338 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 GFOD2Q3B7J2 385 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SMIM21Q3B7S5 101 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 GLT8D1Q68CQ7 371 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 LYPD2Q6UXB3 125 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 USP43Q70EL4 1123 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM58AQ8N1B3 248 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 AJUBAQ96IF1 538 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 WDR13Q9H1Z4 485 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SMURF1Q9HCE7 757 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 VCX3AQ9NNX9 186 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 PKDREJQ9NTG1 2253 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR2AT4A6NND4 320 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 NAPSAO96009 420 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SDC2P34741 201 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 GPR141Q7Z602 305 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMEM203Q969S6 136 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLAMF9Q96A28 289 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 PERPQ96FX8 193 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 RBFOX1Q9NWB1 397 aaKnown RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 NDUFA13Q9P0J0 144 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 OPN4Q9UHM6 478 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SCOCQ9UIL1 159 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPATA2Q9UM82 520 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 KCNK7Q9Y2U2 307 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 C17orf98A8MV24 154 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 CDRT1O95170 752 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 HSMCR30P0CW71 290 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 PPP3R1P63098 170 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 RSBN1Q5VWQ0 802 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 CLEC2AQ6UVW9 174 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF497Q6ZNH5 498 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF554Q86TJ5 538 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 CIARTQ8N365 385 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPICQ8N5J4 248 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SNX22Q96L94 193 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 IL36RNQ9UBH0 155 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 MRPS28Q9Y2Q9 187 aaKnown RBP6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPTAN1Q13813 2472 aaKnown RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ECDO95905 644 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 CHRM2P08172 466 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 USF1P22415 310 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 CD34P28906 385 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 CD80P33681 288 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 RBMXP38159 391 aaKnown RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLC25A26Q70HW3 274 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR51F2Q8NH61 342 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 RAB1CQ92928 201 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SIRPDQ9H106 197 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 METRNQ9UJH8 293 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 GSTK1Q9Y2Q3 226 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM157AC9JC47 383 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 RAB27BO00194 218 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 MFNGO00587 321 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPRY1O43609 319 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMEM50BP56557 158 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 NCS1P62166 190 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM216AQ8WUB2 273 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ACOT12Q8WYK0 555 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 COQ2Q96H96 371 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 Q96MF0 132 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 HIST1H2AAQ96QV6 131 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DCTN5Q9BTE1 182 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 METTL9Q9H1A3 318 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 TCF7L1Q9HCS4 588 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 A0A1B0GW55 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SSX4O60224 188 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 TK1P04183 234 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L2P0CJ85 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L3P0CJ86 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L4P0CJ87 422 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L5P0CJ88 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L6P0CJ89 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L7P0CJ90 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 NAT1P18440 290 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 GATA3P23771 443 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 MEF2CQ06413 473 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 HCP5Q6MZN7 132 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4L9Q6RFH8 374 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR10A7Q8NGE5 316 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 NEIL1Q96FI4 390 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 VRK1Q99986 396 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM192AQ9GZU8 254 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF581Q9P0T4 197 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 DUX4Q9UBX2 424 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ABCA12Q86UK0 2595 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM230AA0A1W2PPH8 454 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms