RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CSF3P09919 207 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SLC2A2P11168 524 aaPredicted RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SLC25A16P16260 332 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 RAB3BP20337 219 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 ZFP36P26651 326 aaKnown RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 HTR2CP28335 458 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 MDH2P40926 338 aaKnown RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 GPR6P46095 362 aaPredicted RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 CEBPDP49716 269 aaPredicted RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 PDLIM4P50479 330 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 EFNB2P52799 333 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 DSCR9P59020 149 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 LSM3P62310 102 aaKnown RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 PIGYQ3MUY2 71 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SFXN4Q6P4A7 337 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 METAP1DQ6UB28 335 aaPredicted RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 DCDC5Q6ZRR9 648 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 GPR141Q7Z602 305 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 C11orf42Q8N5U0 333 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 MAPK1IP1LQ8NDC0 245 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 OR51D1Q8NGF3 324 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 OR5T2Q8NGG2 359 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 OR6M1Q8NGM8 313 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 OR10K1Q8NGX5 313 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 ZNF671Q8TAW3 534 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 NDNFQ8TB73 568 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 TNFAIP8L1Q8WVP5 186 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SLC25A38Q96DW6 304 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 KCTD7Q96MP8 289 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 HIST1H2AAQ96QV6 131 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 BCL7BQ9BQE9 202 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 REG4Q9BYZ8 158 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 NXF2Q9GZY0 626 aaKnown RBP4.1□□□□□ -1.75
LMNB1-208ENST00000504788 DNTTIP1Q9H147 329 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 TCF7L1Q9HCS4 588 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SCOCQ9UIL1 159 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 SSR3Q9UNL2 185 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 POLDIP2Q9Y2S7 368 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 KCNK7Q9Y2U2 307 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 V9GY05 133 aa4.1□□□□□ -1.75
LMNB1-208ENST00000504788 A6NLC8 198 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RFPL4AA6NLU0 287 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 NOTOA8MTQ0 251 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RFPL4AL1F8VTS6 287 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 K7N7A8 449 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 ZNF701M0R085 212 aaPredicted RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RAB27BO00194 218 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 SLC33A1O00400 549 aaPredicted RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 GEMIN2O14893 280 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 SIGLEC5O15389 551 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 PAHP00439 452 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 KNG1P01042 644 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CSN2P05814 226 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CGB3P0DN86 165 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CGB7P0DN87 165 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CALCBP10092 127 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 GLRA1P23415 457 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 POU3F4P49335 361 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RBM11P57052 281 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RPS27AP62979 156 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 PPP3R1P63098 170 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MXD1Q05195 221 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MZT1Q08AG7 82 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 C2orf76Q3KRA6 126 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MOGAT2Q3SYC2 334 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 TIMM50Q3ZCQ8 353 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 SPIN3Q5JUX0 258 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CLEC2AQ6UVW9 174 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 GLIPR1L1Q6UWM5 242 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MKXQ8IYA7 352 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 FAM58AQ8N1B3 248 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 FAM216BQ8N7L0 139 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 ZNRF1Q8ND25 227 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 LY6G5BQ8NDX9 201 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 OR5H6Q8NGV6 325 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 RAB2BQ8WUD1 216 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 HPS1Q92902 700 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 FOXRED1Q96CU9 486 aaPredicted RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MRPS24Q96EL2 167 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 COQ2Q96H96 371 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 NICN1Q9BSH3 213 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MRI1Q9BV20 369 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 SLIRPQ9GZT3 109 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 LIN7BQ9HAP6 207 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 VCX3AQ9NNX9 186 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 EXOSC4Q9NPD3 245 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 NLKQ9UBE8 527 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 CKLFQ9UBR5 152 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 OR5V1Q9UGF6 321 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 STEAP1Q9UHE8 339 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 EDARQ9UNE0 448 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 MRPS28Q9Y2Q9 187 aaKnown RBP4.09□□□□□ -1.75
LMNB1-208ENST00000504788 NF1P21359 2839 aa4.09□□□□□ -1.75
LMNB1-208ENST00000504788 TRAV38-1A0A0B4J264 116 aa4.09□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM272A0A1B0GTI8 110 aa4.09□□□□□ -1.76
LMNB1-208ENST00000504788 hCG_1807616A0A1W2PRN6 198 aa4.09□□□□□ -1.76
LMNB1-208ENST00000504788 LRRC30A6NM36 301 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms