RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 METAP1DQ6UB28 335 aaPredicted RBP11.65□□□□□ -0.54
HOXC9-202ENST00000504557 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 Q8IYB0 196 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 ZFP41Q8N8Y5 198 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 DMRTB1Q96MA1 342 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 GPER1Q99527 375 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 FGF20Q9NP95 211 aaPredicted RBP11.65□□□□□ -0.54
HOXC9-202ENST00000504557 MRPS18AQ9NVS2 196 aaKnown RBP11.65□□□□□ -0.54
HOXC9-202ENST00000504557 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
HOXC9-202ENST00000504557 CLEC2DQ9UHP7 191 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 PNMA8CA0A1B0GUJ8 204 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 A0A1W2PPE2 198 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 A0A1W2PR64 198 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 ERICH4A6NGS2 130 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 GPR137BO60478 399 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 DCKP27707 260 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 CAPGP40121 348 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 BMXP51813 675 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 RAG2P55895 527 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 ADARB1P78563 741 aaKnown RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 IL18R1Q13478 541 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 GRK1Q15835 563 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 OGFRL1Q5TC84 451 aaPredicted RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 HCP5Q6MZN7 132 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 SERPINA12Q8IW75 414 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 C8orf59Q8N0T1 100 aaPredicted RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 OR8H2Q8N162 312 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 OR52N4Q8NGI2 321 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 OR5D14Q8NGL3 314 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 RGP1Q92546 391 aaPredicted RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 FAM192AQ9GZU8 254 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 DPAGT1Q9H3H5 408 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 C8orf4Q9NR00 106 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 TAS2R4Q9NYW5 299 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 SF3B6Q9Y3B4 125 aaKnown RBP11.64□□□□□ -0.55
HOXC9-202ENST00000504557 POMT1Q9Y6A1 747 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 FBN3Q75N90 2809 aa11.64□□□□□ -0.55
HOXC9-202ENST00000504557 IRGMA1A4Y4 181 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 MAGEB3O15480 346 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 SULT1B1O43704 296 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 PSPNO60542 156 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF737O75373 536 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 LGALS4P56470 323 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 KISS1Q15726 138 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 LY6EQ16553 131 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 TAF9Q16594 264 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 TRAPPC6BQ86SZ2 158 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 LDLRAD3Q86YD5 345 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 ZSCAN4Q8NAM6 433 aaPredicted RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 OR4S1Q8NGB4 309 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 OR51A2Q8NGJ7 313 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 OR13C5Q8NGS8 318 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 GGHQ92820 318 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 ORAI1Q96D31 301 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 TMEM80Q96HE8 168 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 SNX22Q96L94 193 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 VCXQ9H320 206 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 EXOSC4Q9NPD3 245 aaKnown RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 C1RLQ9NZP8 487 aa11.63□□□□□ -0.55
HOXC9-202ENST00000504557 NKX1-2Q9UD57 310 aaPredicted RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 DIMT1Q9UNQ2 313 aaKnown RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 EXOSC1Q9Y3B2 195 aaKnown RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 SIRT4Q9Y6E7 314 aaPredicted RBP11.63□□□□□ -0.55
HOXC9-202ENST00000504557 H3BUX3 64 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 HSPB6O14558 160 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 SH2D1BO14796 132 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 OR2H2O95918 312 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 LALBAP00709 142 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF44P15621 663 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 RAB3AP20336 220 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 RELBQ01201 579 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 ST3GAL4Q11206 333 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 DYNC1I2Q13409 638 aaKnown RBP11.62□□□□□ -0.55
HOXC9-202ENST00000504557 MED21Q13503 144 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
HOXC9-202ENST00000504557 C17orf107Q6ZR85 190 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 AHSA2Q719I0 299 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 PARP16Q8N5Y8 322 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 BPIFB6Q8NFQ5 453 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 GPR148Q8TDV2 347 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 DYRK2Q92630 601 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 JAM3Q9BX67 310 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms