RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SDHAF3Q9NRP4 125 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 DDIT4Q9NX09 232 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 VAPAQ9P0L0 249 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 CLEC2DQ9UHP7 191 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 INSIG2Q9Y5U4 225 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 SLC22A7Q9Y694 548 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 TICRRQ7Z2Z1 1910 aa2.69□□□□□ -1.98
TRAPPC13-205ENST00000504243 MYO3BQ8WXR4 1341 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 GPR179Q6PRD1 2367 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 SCN4AP35499 1836 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 C16orf90A8MZG2 172 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 C9JQL5 133 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZNF593O00488 134 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 NIPSNAP2O75323 286 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 CDK14O94921 469 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 RLN2P04090 185 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 GIMD1P0DJR0 217 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 BGNP21810 368 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 MSNP26038 577 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 TUFMP49411 452 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 ACOT2P49753 483 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 DSTNP60981 165 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 FLI1Q01543 452 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 TOMM34Q15785 309 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 SP6Q3SY56 376 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZNF678Q5SXM1 525 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 APOBEC3HQ6NTF7 200 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 C16orf47Q6ZP98 133 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 CALHM3Q86XJ0 350 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZDHHC22Q8N966 263 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 SLC26A10Q8NG04 563 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 FAM57AQ8TBR7 257 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 CCDC124Q96CT7 223 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 QKIQ96PU8 341 aaKnown RBP eCLIP2.68□□□□□ -1.981e-6■■■■□ 26.5
TRAPPC13-205ENST00000504243 GOLPH3Q9H4A6 298 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 PSTPIP2Q9H939 334 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 SND1-IT1Q9HBX3 110 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 ACOT13Q9NPJ3 140 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 C12orf4Q9NQ89 552 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 MS4A12Q9NXJ0 267 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 HMGXB4Q9UGU5 601 aa2.68□□□□□ -1.98
TRAPPC13-205ENST00000504243 MGAT4DA6NG13 374 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 SCN2BO60939 215 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZMPSTE24O75844 475 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 CST4P01036 141 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 IGKV1D-16P01601 117 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 SNRPAP09012 282 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 TAC1P20366 129 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 P2RY2P41231 377 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 TGM4P49221 684 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 SLC18A1P54219 525 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 OR2B6P58173 313 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 RPS11P62280 158 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 UBE2IP63279 158 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 BASP1P80723 227 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 ELOCQ15369 112 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 TNXAQ16473 311 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 KCTD16Q68DU8 428 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZNF773Q6PK81 442 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 OR5H2Q8NGV7 314 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 RILPQ96NA2 401 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 RTBDNQ9BSG5 229 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 UPF3BQ9BZI7 483 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 NDEL1Q9GZM8 345 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 SRRQ9GZT4 340 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 CENPHQ9H3R5 247 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 PARP11Q9NR21 331 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 NLE1Q9NVX2 485 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 EURLQ9NYK6 297 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 MRM2Q9UI43 246 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 ATPIF1Q9UII2 106 aa2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 SETD1AO15047 1707 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-205ENST00000504243 IGHV1-46P01743 117 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 PFN1P07737 140 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 RNASE2P10153 161 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 CRATP43155 626 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 DNASE1L1P49184 302 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 XKP51811 444 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 DR1Q01658 176 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 IL15RAQ13261 267 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 ATP6AP1LQ52LC2 224 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 TTMPQ5BVD1 217 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 FAHD1Q6P587 224 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 PRNTQ86SH4 94 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 CYP4Z1Q86W10 505 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 C17orf78Q8N4C9 275 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 OR7G1Q8NGA0 311 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 OR51Q1Q8NH59 317 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 SHANK2-AS3Q9BTD1 123 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 SHCBP1LQ9BZQ2 653 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 INIPQ9NRY2 104 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 DNAJC27Q9NZQ0 273 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 NXT1Q9UKK6 140 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 SLC22A14Q9Y267 594 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 KLF13Q9Y2Y9 288 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 ACOT9Q9Y305 439 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 ZNF780BQ9Y6R6 833 aa2.66□□□□□ -1.98
TRAPPC13-205ENST00000504243 CALUO43852 315 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-205ENST00000504243 KLHL2O95198 593 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms