RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CLVS2Q5SYC1 327 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 ANGPTL5Q86XS5 388 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 OR9Q2Q8NGE9 314 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 OR52N4Q8NGI2 321 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 OR51E1Q8TCB6 317 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 PYURFQ96I23 114 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 ZNF286AQ9HBT8 521 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 PCDHB16Q9NRJ7 776 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 DNAJB9Q9UBS3 223 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 GLS2Q9UI32 602 aa12.38□□□□□ -0.43
PDLIM7-210ENST00000503827 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 RBMY1BA6NDE4 496 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 RBMY1EA6NEQ0 496 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 AP4M1O00189 453 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 DLGAP1O14490 977 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 MGST3O14880 152 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 DHRS3O75911 302 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 IGHA1P01876 353 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 SEMG1P04279 462 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 FABP3P05413 133 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 RBMY1DP0C7P1 496 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 ESRRGP62508 458 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 FOXE3Q13461 319 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 GPR50Q13585 617 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 FHL3Q13643 280 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 C16orf89Q6UX73 402 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 ZNF429Q86V71 674 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 C4orf3Q8WVX3 66 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 RPEQ96AT9 228 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 ATP6V1G3Q96LB4 118 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 TEAD3Q99594 435 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 BTBD10Q9BSF8 475 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 PBOV1Q9GZY1 135 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 OR51V1Q9H2C8 321 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 FAM206AQ9NX38 181 aa12.37□□□□□ -0.43
PDLIM7-210ENST00000503827 TRGV10A0A0A0MS01 117 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 SELENOFO60613 162 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 HAND1O96004 215 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 GASTP01350 101 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 ELANEP08246 267 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 ERP29P30040 261 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 P2RX3P56373 397 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 TMEM42Q69YG0 159 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 C8orf82Q6P1X6 216 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 HRASLS5Q96KN8 279 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 ARMC1Q9NVT9 282 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 TAS2R1Q9NYW7 299 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 KLHDC2Q9Y2U9 406 aa12.36□□□□□ -0.43
PDLIM7-210ENST00000503827 LINC01548A6NM66 108 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 F8VVB4 439 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 F8VWA3 439 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 PSPNO60542 156 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 SASH3O75995 380 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 KRT36O76013 467 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 SOX14O95416 240 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 GP9P14770 177 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 SF3A3Q12874 501 aaKnown RBP eCLIP12.35□□□□□ -0.432e-7■■■■■ 49.4
PDLIM7-210ENST00000503827 HNF4GQ14541 408 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 ENTHD1Q8IYW4 607 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 RNF148Q8N7C7 305 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 EFCAB1Q9HAE3 211 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 SEBOXQ9HB31 216 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 ISYNA1Q9NPH2 558 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
PDLIM7-210ENST00000503827 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 INMTO95050 263 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 SPNP16150 400 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 GDNFP39905 211 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 DEGS2Q6QHC5 323 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 OR4D6Q8NGJ1 314 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 CORO2AQ92828 525 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 SLAMF9Q96A28 289 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 MROQ9BYG7 248 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 GORASP2Q9H8Y8 452 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 ABCD2Q9UBJ2 740 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 SLC7A11Q9UPY5 501 aa12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
PDLIM7-210ENST00000503827 A0A087X0M5 115 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 A0A1B0GX30 115 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 FUOMA2VDF0 154 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 TRIM64CA6NLI5 447 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 COX4I1P13073 169 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 ALOX5APP20292 161 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 MYF6P23409 242 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms