RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TMEM272A0A1B0GTI8 110 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1B0GU03 582 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 hCG_1809904A0A1W2PP81 198 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1W2PR64 198 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1W2PRV1 198 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 KIAA1324LA8MWY0 1029 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 KLF7O75840 302 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SEMA4FO95754 770 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 IL18BPO95998 194 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TOMM40O96008 361 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RENP00797 406 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 AMBPP02760 352 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 REG1AP05451 166 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ADRA2AP08913 450 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PIRTP0C851 137 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 HNRNPA2B1P22626 353 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PEBP1P30086 187 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 BCL6P41182 706 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 NAA10P41227 235 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RAB28P51157 221 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 HNRNPA3P51991 378 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 LSM6P62312 80 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PPP2CBP62714 309 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PPP2CAP67775 309 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 FOXF1Q12946 379 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PPP1R1AQ13522 171 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 KIR2DS3Q14952 304 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SLC9A3R2Q15599 337 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ADIRFQ15847 76 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 KIAA0895LQ68EN5 471 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RPL7L1Q6DKI1 246 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SLC25A24Q6NUK1 477 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF836Q6ZNA1 936 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TMPRSS7Q7RTY8 843 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 LRRTM4Q86VH4 590 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 CATSPERDQ86XM0 798 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ADIPOR1Q96A54 375 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM169Q96HH4 297 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 GINS3Q9BRX5 216 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SELENOIQ9C0D9 397 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SLC5A7Q9GZV3 580 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ATG10Q9H0Y0 220 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PRO1933Q9H354 126 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ELL3Q9HB65 397 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 GPR84Q9NQS5 396 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 C2orf42Q9NWW7 574 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SERGEFQ9UGK8 458 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 IL17BQ9UHF5 180 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 MRPS33Q9Y291 106 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TMED7Q9Y3B3 224 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF727A8MUV8 499 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 HLA-DQA2P01906 255 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 HMGN2P05204 90 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SRFP11831 508 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 EPHA8P29322 1005 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PGGT1BP53609 377 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF92Q03936 586 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TLE3Q04726 772 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 POM121L1PQ3SYA9 428 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 FNDC3BQ53EP0 1204 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 PRAMEF14Q5SWL7 426 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF705AQ6ZN79 300 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 SLC22A24Q8N4F4 322 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM99Q8N816 258 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ADAD2Q8NCV1 583 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 OR4D9Q8NGE8 314 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 OR5H2Q8NGV7 314 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 HMGB4Q8WW32 186 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ISOC2Q96AB3 205 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF668Q96K58 619 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 NICN1Q9BSH3 213 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 GPR174Q9BXC1 333 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 EBPLQ9BY08 206 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 NPFFR1Q9GZQ6 430 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 MTIF3Q9H2K0 278 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM9BQ9NQ34 198 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 MRPL27Q9P0M9 148 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 CLEC4EQ9ULY5 219 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 URB1O60287 2271 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RTTNQ86VV8 2226 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 IGHV1-69-2A0A0G2JMI3 117 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 FAM183AA6NL82 134 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF732B4DXR9 585 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 M0R3H8 397 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 AGPAT2O15120 278 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 CTSDP07339 412 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ELFN1P0C7U0 828 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 OR12D1P0DN82 309 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 TNFSF4P23510 183 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 F2RP25116 425 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 ASCL1P50553 236 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RBX1P62877 108 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RAB30Q15771 203 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 POU2AF1Q16633 256 aa2.44□□□□□ -2.02
NEDD4-204ENST00000503468 RNASE12Q5GAN4 147 aaKnown RBP2.44□□□□□ -2.02
NEDD4-204ENST00000503468 FAM27D1Q5T7N8 215 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms