RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 GYS2P54840 703 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 GP2P55259 537 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ISL1P61371 349 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF91Q05481 1191 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 MFGE8Q08431 387 aaPredicted RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 UBE2V2Q15819 145 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 NSUN5P1Q3KNT7 163 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 TCTEX1D4Q5JR98 221 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 CCDC144NLQ6NUI1 221 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF782Q6ZMW2 699 aaPredicted RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC16A12Q6ZSM3 486 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 UTS2BQ765I0 119 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ASRGL1Q7L266 308 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 KCTD20Q7Z5Y7 419 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 CATSPERDQ86XM0 798 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 SAXO1Q8IYX7 474 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 COMMD1Q8N668 190 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF676Q8N7Q3 588 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ASCC1Q8N9N2 400 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 OR4X2Q8NGF9 303 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM163Q8TC26 289 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 UTP4Q969X6 686 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 SPSB1Q96BD6 273 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 BORCS8Q96FH0 119 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF488Q96MN9 340 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 RBM14Q96PK6 669 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 NKX3-1Q99801 234 aaPredicted RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 OSBPL10Q9BXB5 764 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM107BQ9H098 131 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 LINC00574Q9H8X3 128 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 PLEKHA1Q9HB21 404 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 PCDHB16Q9NRJ7 776 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 GPR173Q9NS66 373 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ZFP57Q9NU63 452 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 TVP23BQ9NYZ1 205 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 H2AFY2Q9P0M6 372 aaPredicted RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 OR14J1Q9UGF5 321 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 WARS2Q9UGM6 360 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 MRM2Q9UI43 246 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 IKZF2Q9UKS7 526 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 DNAH9Q9NYC9 4486 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 IGKV1-27A0A075B6S5 117 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ZAR1LA6NP61 321 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 E9PQ18 207 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF670-ZNF695F2Z2N8 137 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 F8VVB4 439 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 F8VWA3 439 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 K7EIL1 84 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 FGF16O43320 207 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 SYT7O43581 403 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PRKYO43930 277 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PSPNO60542 156 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 FKBP6O75344 327 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 KDM4BO94953 1096 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 HAND1O96004 215 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CYB5AP00167 134 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 MT-ND2P03891 347 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 AMY1AP04745 511 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 AMY2AP04746 511 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 KRT8P05787 483 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PF4V1P10720 104 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PRKACBP22694 351 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PAX6P26367 422 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CEBPDP49716 269 aaPredicted RBP4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 DAPP51397 102 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ATP1B3P54709 279 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 P2RX3P56373 397 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 EDDM3BP56851 147 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CBX1P83916 185 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC34A1Q06495 639 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 GRK1Q15835 563 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 DNAL1Q4LDG9 190 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM244Q5VVB8 128 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM236Q5W0B7 351 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 C12orf73Q69YU5 71 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 KDM4DQ6B0I6 523 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 FDX2Q6P4F2 183 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 PLEKHG7Q6ZR37 379 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 Q6ZS46 218 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 LHFPL2Q6ZUX7 228 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CENPVQ7Z7K6 275 aaPredicted RBP4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ANGPTL5Q86XS5 388 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM219Q86XT9 240 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC35F2Q8IXU6 374 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM58AQ8N1B3 248 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ABHD12Q8N2K0 398 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 OSR2Q8N2R0 312 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CHST4Q8NCG5 386 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 OR10A7Q8NGE5 316 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 OR51D1Q8NGF3 324 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 OR52N4Q8NGI2 321 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 TRUB1Q8WWH5 349 aaKnown RBP4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 WWC2-AS2Q96NR7 200 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 MBOAT4Q96T53 435 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 B9D2Q9BPU9 175 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 APOL4Q9BPW4 351 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 CADM1Q9BY67 442 aaKnown RBP4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 COMMD4Q9H0A8 199 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 GABARAPL1Q9H0R8 117 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms