RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 MIXL1Q9H2W2 232 aa9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 NARFLQ9H6Q4 476 aa9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 BARX1Q9HBU1 254 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 NLKQ9UBE8 527 aa9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 POLDIP2Q9Y2S7 368 aa9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 MAB21L2Q9Y586 359 aa9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 SETD2Q9BYW2 2564 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-210ENST00000498756 VPS13CQ709C8 3753 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 A0A096LNT2 108 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 IGHV4-61A0A0C4DH41 118 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 TMEM82A0PJX8 343 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 OR2AT4A6NND4 320 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 FOXI3A8MTJ6 420 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 IFNL4K9M1U5 179 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 GEMIN2O14893 280 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 SOCS1O15524 211 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 CYB5AP00167 134 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 MGMTP16455 207 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 IL2RGP31785 369 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 PRDX2P32119 198 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 TMEM50BP56557 158 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 SEC61A1P61619 476 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 BTG1P62324 171 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 TAF9Q16594 264 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 CNPY1Q3B7I2 92 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNF404Q494X3 552 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 Q5PR19 223 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 SHEQ5VZ18 495 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 OR51T1Q8NGJ9 327 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 FAM168AQ92567 244 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 HPS1Q92902 700 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 Q96M66 194 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 GAFA1Q96PS6 74 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 BATF3Q9NR55 127 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 RASL12Q9NYN1 266 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 COMMD3Q9UBI1 195 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 FBLN5Q9UBX5 448 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 OR14J1Q9UGF5 321 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 ST3GAL6Q9Y274 331 aa9.01□□□□□ -0.97
GPATCH4-210ENST00000498756 ACANP16112 2415 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 FLNAP21333 2647 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 KNG1P01042 644 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 CSTBP04080 98 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 UBBP0CG47 229 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 NR4A2P43354 598 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 GABRA2P47869 451 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 LMO4P61968 165 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 RPS27AP62979 156 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 COL10A1Q03692 680 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 SCN1BQ07699 218 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 MADCAM1Q13477 382 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNF146Q15072 292 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNF788Q6ZQV5 615 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 CMTM4Q8IZR5 234 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 C1orf87Q8N0U7 546 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 FAM89BQ8N5H3 189 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNRF1Q8ND25 227 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 MAPK1IP1LQ8NDC0 245 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 CLDND2Q8NHS1 167 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 KCNG3Q8TAE7 436 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 RAB1CQ92928 201 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 CPNE2Q96FN4 548 aaPredicted RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 S100A13Q99584 98 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 NXF2Q9GZY0 626 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 CCDC59Q9P031 241 aaKnown RBP9□□□□□ -0.97
GPATCH4-210ENST00000498756 DNAJB11Q9UBS4 358 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 GHRLQ9UBU3 117 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 SPATA2Q9UM82 520 aa9□□□□□ -0.97
GPATCH4-210ENST00000498756 TRAV38-1A0A0B4J264 116 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 TRAV24A0A0B4J272 114 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 ISPDA4D126 451 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 CEACAM18A8MTB9 384 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 SIRPB1O00241 398 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 PSPNO60542 156 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 HPGDSO60760 199 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 ZNF737O75373 536 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 OR2H2O95918 312 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 HAND1O96004 215 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 EIF4EP06730 217 aaKnown RBP8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 WNT2P09544 360 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 GTF2F2P13984 249 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 FOSL1P15407 271 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 MUC1P15941 1255 aaPredicted RBP8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 ELK1P19419 428 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 GABRR1P24046 479 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 MDH2P40926 338 aaKnown RBP8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 VEGFCP49767 419 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 BMXP51813 675 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 MICBQ29980 383 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 NHLRC3Q5JS37 347 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 ATPAF1Q5TC12 328 aaPredicted RBP8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 OLFML2AQ68BL7 652 aa8.99□□□□□ -0.97
GPATCH4-210ENST00000498756 CLEC2AQ6UVW9 174 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms