RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MRPL48Q96GC5 212 aaKnown RBP13.11□□□□□ -0.31
NR1H3-227ENST00000498548 OPALINQ96PE5 141 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
NR1H3-227ENST00000498548 CMYA5Q8N3K9 4069 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 A0A1B0GUS0 222 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 C17orf98A8MV24 154 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 H3BUX3 64 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
NR1H3-227ENST00000498548 CYB5AP00167 134 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 GABRR1P24046 479 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 RAB40BQ12829 278 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 MIDNQ504T8 468 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 DHRS7BQ6IAN0 325 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-227ENST00000498548 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-227ENST00000498548 BEND2Q8NDZ0 799 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 OR4S1Q8NGB4 309 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 STMN2Q93045 179 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 PPA2Q9H2U2 334 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF696Q9H7X3 374 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
NR1H3-227ENST00000498548 SMPD3Q9NY59 655 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-227ENST00000498548 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 TRRAPQ9Y4A5 3859 aa13.1□□□□□ -0.31
NR1H3-227ENST00000498548 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 ANKRD65E5RJM6 399 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 SIRPB1O00241 398 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 PSPNO60542 156 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 ZFPL1O95159 310 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-227ENST00000498548 GRK1Q15835 563 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 PRR31Q5SQ13 230 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 TCF23Q7RTU1 214 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 SPSB1Q96BD6 273 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 MEGF9Q9H1U4 602 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 NEK6Q9HC98 313 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
NR1H3-227ENST00000498548 hCG_1809904A0A1W2PP81 198 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 A0A1W2PPE2 198 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 A0A1W2PR64 198 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 A0A1W2PRV1 198 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 ARG1P05089 322 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 LIMS3P0CW19 117 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 LIMS4P0CW20 117 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 ZNF728P0DKX0 622 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 PEX2P28328 305 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 ETV1P50549 477 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 LGALS4P56470 323 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 RPL15P61313 204 aaKnown RBP13.08□□□□□ -0.32
NR1H3-227ENST00000498548 SCN1BQ07699 218 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 BRICD5Q6PL45 260 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 Q8IYB0 196 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 DYNAPQ8N1N2 210 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 TSEN15Q8WW01 171 aaKnown RBP13.08□□□□□ -0.32
NR1H3-227ENST00000498548 CYGBQ8WWM9 190 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 COMMD4Q9H0A8 199 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 HMG20AQ9NP66 347 aa13.08□□□□□ -0.32
NR1H3-227ENST00000498548 FGF20Q9NP95 211 aaPredicted RBP13.08□□□□□ -0.32
NR1H3-227ENST00000498548 KIAA2026Q5HYC2 2103 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 MT-ND2P03891 347 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 HCKP08631 526 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 OR3A1P47881 315 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 SOX2P48431 317 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 RAB13P51153 203 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 PROK1P58294 105 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 IL18R1Q13478 541 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 ZNF146Q15072 292 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 LRRC75BQ2VPJ9 315 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 LDLRAD2Q5SZI1 272 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 OR2G6Q5TZ20 316 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 SLC35E4Q6ICL7 350 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 PPP1R35Q8TAP8 253 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 ZNF714Q96N38 554 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 MYCBPQ99417 103 aaPredicted RBP13.07□□□□□ -0.32
NR1H3-227ENST00000498548 NKX3-1Q99801 234 aaPredicted RBP13.07□□□□□ -0.32
NR1H3-227ENST00000498548 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
NR1H3-227ENST00000498548 ING3Q9NXR8 418 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 DHDHQ9UQ10 334 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 SIGLEC9Q9Y336 463 aa13.07□□□□□ -0.32
NR1H3-227ENST00000498548 hADV38S2A0JD32 116 aa13.06□□□□□ -0.32
NR1H3-227ENST00000498548 SH2D1BO14796 132 aa13.06□□□□□ -0.32
NR1H3-227ENST00000498548 MMP23AO75900 390 aa13.06□□□□□ -0.32
NR1H3-227ENST00000498548 KDM4BO94953 1096 aa13.06□□□□□ -0.32
NR1H3-227ENST00000498548 OR2H2O95918 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms