RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SNX22Q96L94 193 aa10.53□□□□□ -0.72
HSPG2-213ENST00000498495 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-213ENST00000498495 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
HSPG2-213ENST00000498495 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
HSPG2-213ENST00000498495 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
HSPG2-213ENST00000498495 TAS2R4Q9NYW5 299 aa10.53□□□□□ -0.72
HSPG2-213ENST00000498495 IGKV1-12A0A0C4DH73 117 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 PNMA8CA0A1B0GUJ8 204 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 SH2D1BO14796 132 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 KDM4BO94953 1096 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 HAND1O96004 215 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 IGKV1D-12P01611 117 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 ALDOBP05062 364 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 CELP19835 753 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
HSPG2-213ENST00000498495 DUSP1P28562 367 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 PPP3R1P63098 170 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF146Q15072 292 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 TUSC1Q2TAM9 212 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 DEFB112Q30KQ8 113 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 Q499Y3 187 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 SPIN3Q5JUX0 258 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 RNLSQ5VYX0 342 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF529Q6P280 563 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 GDPD3Q7L5L3 318 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 Q8N7P7 452 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-213ENST00000498495 OR52N4Q8NGI2 321 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 OR51A2Q8NGJ7 313 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 OR13C5Q8NGS8 318 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 PPP1R35Q8TAP8 253 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 FAM216AQ8WUB2 273 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 ANKRD60Q9BZ19 345 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 METTL8Q9H825 291 aaKnown RBP10.52□□□□□ -0.73
HSPG2-213ENST00000498495 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 ESM1Q9NQ30 184 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 C19orf12Q9NSK7 152 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 IL36RNQ9UBH0 155 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 GSTK1Q9Y2Q3 226 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 PCDHGB5Q9Y5G0 923 aa10.52□□□□□ -0.73
HSPG2-213ENST00000498495 TRBV5-5A0A0J9YX44 114 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 hCG_1809904A0A1W2PP81 198 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PPE2 198 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PR64 198 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PRV1 198 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF737O75373 536 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 GABRR1P24046 479 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 PRTN3P24158 256 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 BDKRB2P30411 391 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 EDDM3BP56851 147 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 ZP1P60852 638 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 UBA52P62987 128 aaKnown RBP10.51□□□□□ -0.73
HSPG2-213ENST00000498495 CRIP3Q6Q6R5 217 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 METAP1DQ6UB28 335 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-213ENST00000498495 TNFAIP8L1Q8WVP5 186 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 ORAI1Q96D31 301 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 PGLYRP3Q96LB9 341 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 DUX5Q96PT3 197 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 MND1Q9BWT6 205 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 CDCA4Q9BXL8 241 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 EXOSC4Q9NPD3 245 aaKnown RBP10.51□□□□□ -0.73
HSPG2-213ENST00000498495 NOX4Q9NPH5 578 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
HSPG2-213ENST00000498495 FBN1P35555 2871 aaKnown RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 MDFIC2A0A1B0GVS7 189 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PPK0 400 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 TMEM82A0PJX8 343 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 RNASEK-C17orf49H0YIS7 233 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 CD1AP06126 327 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF93P35789 620 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 TGFBR2P37173 567 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 VHLP40337 213 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 MTNR1BP49286 362 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 BMXP51813 675 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 DLX1P56177 255 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 RPS11P62280 158 aaKnown RBP eCLIP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ACTG1P63261 375 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 SLC35A2P78381 396 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 BDH1Q02338 343 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 SCN1BQ07699 218 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ACSM1Q08AH1 577 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 SPHARQ15513 63 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 MED22Q15528 200 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 GRK1Q15835 563 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 NCR3LG1Q68D85 454 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ASPHD2Q6ICH7 369 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 C17orf107Q6ZR85 190 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 OR8H2Q8N162 312 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 PXT1Q8NFP0 134 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 GCDHQ92947 438 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 SLC25A28Q96A46 364 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 CNBD2Q96M20 576 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 S100A13Q99584 98 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 CCDC90BQ9GZT6 254 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 CHST6Q9GZX3 395 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 PRDM13Q9H4Q3 707 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms