RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MRPS7Q9Y2R9 242 aaKnown RBP11.99□□□□□ -0.49
VPS26A-209ENST00000497564 RBMX2Q9Y388 322 aaKnown RBP11.99□□□□□ -0.49
VPS26A-209ENST00000497564 DSCAMO60469 2012 aa11.99□□□□□ -0.49
VPS26A-209ENST00000497564 MED13LQ71F56 2210 aa11.99□□□□□ -0.49
VPS26A-209ENST00000497564 F8VVB4 439 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 F8VWA3 439 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 CDIPTO14735 213 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SOCS1O15524 211 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
VPS26A-209ENST00000497564 GRPP07492 148 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 DGCR2P98153 550 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SSBP1Q04837 148 aaKnown RBP11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SCN1BQ07699 218 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 PNLIPRP3Q17RR3 467 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 MST1LQ2TV78 715 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 FAM209AQ5JX71 171 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 PRAMEF6Q5VXH4 476 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 STEAP3Q658P3 488 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SNX29P2Q8IUI4 249 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 FAM58AQ8N1B3 248 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 FBXL14Q8N1E6 418 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 RAB3CQ96E17 227 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-209ENST00000497564 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 RBFOX1Q9NWB1 397 aaKnown RBP11.98□□□□□ -0.49
VPS26A-209ENST00000497564 HSF4Q9ULV5 492 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 ST3GAL6Q9Y274 331 aa11.98□□□□□ -0.49
VPS26A-209ENST00000497564 SETD2Q9BYW2 2564 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-209ENST00000497564 ZFHX3Q15911 3703 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 A0A1W2PQ09 198 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 H3BUI4 141 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 MFNGO00587 321 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 SPRY3O43610 288 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 CA11O75493 328 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 HIST1H1DP16402 221 aaKnown RBP11.97□□□□□ -0.49
VPS26A-209ENST00000497564 BLVRBP30043 206 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-209ENST00000497564 PRSS3P35030 304 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 PMELP40967 661 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-209ENST00000497564 MPPED2Q15777 294 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 PCGF3Q3KNV8 242 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 PIGYQ3MUY2 71 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 PLAC9Q5JTB6 97 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 TRIQKQ629K1 86 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 SIGIRRQ6IA17 410 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 MUC15Q8N387 334 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 OR52I2Q8NH67 350 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 SETD6Q8TBK2 473 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 Q8TCH9 128 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 GPX8Q8TED1 209 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 FCAMRQ8WWV6 532 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 ST8SIA4Q92187 359 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 MS4A5Q9H3V2 200 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 IFT22Q9H7X7 185 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 FN3KRPQ9HA64 309 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 ARID1AO14497 2285 aa11.97□□□□□ -0.49
VPS26A-209ENST00000497564 A6NLC8 198 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 SERPINE3A8MV23 424 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 H7C417 338 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 GEMIN2O14893 280 aaKnown RBP11.96□□□□□ -0.49
VPS26A-209ENST00000497564 PRKACAP17612 351 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 GABRR1P24046 479 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 CHATP28329 748 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 TAF9Q16594 264 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 CDNFQ49AH0 187 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 Q6ZTK2 550 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 CHST4Q8NCG5 386 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 EMG1Q92979 244 aaKnown RBP11.96□□□□□ -0.49
VPS26A-209ENST00000497564 NINJ1Q92982 152 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 FBXW5Q969U6 566 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 ARHGAP5-AS1Q96IT6 56 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 ZNF488Q96MN9 340 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 PECRQ9BY49 303 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 RASL12Q9NYN1 266 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 RCC2Q9P258 522 aaKnown RBP11.96□□□□□ -0.49
VPS26A-209ENST00000497564 MTFP1Q9UDX5 166 aa11.96□□□□□ -0.49
VPS26A-209ENST00000497564 DSCAML1Q8TD84 2053 aa11.96□□□□□ -0.5
VPS26A-209ENST00000497564 MEIOCA2RUB1 952 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 TMEM235A6NFC5 223 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 SRRM5B3KS81 715 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 HS3ST1O14792 307 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 LANCL1O43813 399 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 PDCD6O75340 191 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 LPLP06858 475 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 PTHLHP12272 177 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 GNB3P16520 340 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 DNASE1P24855 282 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 PPOXP50336 477 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 DEFA1P59665 94 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 DEFA3P59666 94 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 SNRPD2P62316 118 aaKnown RBP11.95□□□□□ -0.5
VPS26A-209ENST00000497564 ASAH1Q13510 395 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 ZNF146Q15072 292 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 SPRNQ5BIV9 151 aa11.95□□□□□ -0.5
VPS26A-209ENST00000497564 SPIN3Q5JUX0 258 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms