RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF184Q99676 751 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 RHOFQ9HBH0 211 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 C12orf4Q9NQ89 552 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 RBM22Q9NW64 420 aaKnown RBP eCLIP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 STOML2Q9UJZ1 356 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 MOKQ9UQ07 419 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 FLVCR1Q9Y5Y0 555 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 DOCK7Q96N67 2140 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ATAD5Q96QE3 1844 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 CASP8AP2Q9UKL3 1982 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 CEACAM18A8MTB9 384 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 J3QT63 122 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 KLF8O95600 359 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 SLC25A27O95847 323 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 IFNA16P05015 189 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 PGAM2P15259 253 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF17P17021 662 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 PSMA1P25786 263 aaKnown RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 GGT2P36268 569 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 IFNGR2P38484 337 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 VSX2P58304 361 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 MTPNP58546 118 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 RPS23P62266 143 aaKnown RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 RANP62826 216 aaKnown RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 FAM53BQ14153 422 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 HLA-DRB5Q30154 266 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 CDNFQ49AH0 187 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 SAXO2Q658L1 398 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 CCDC121Q6ZUS5 278 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 LINC00173Q6ZV60 143 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 RIMKLAQ8IXN7 391 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 OR1M1Q8NGA1 313 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 OR6N1Q8NGY5 312 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 STOML3Q8TAV4 291 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 DTD1Q8TEA8 209 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 PGLYRP3Q96LB9 341 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 TEAD3Q99594 435 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 EBNA1BP2Q99848 306 aaKnown RBP4.62□□□□□ -1.67
BRCA1-224ENST00000497488 UBXN6Q9BZV1 441 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF556Q9HAH1 456 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 COMMD9Q9P000 198 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 RAB22AQ9UL26 194 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 MMACHCQ9Y4U1 282 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 CENPFP49454 3210 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 MYH1P12882 1939 aa4.62□□□□□ -1.67
BRCA1-224ENST00000497488 LOC285556D6RIA3 1793 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 IGLV7-46A0A075B6I9 117 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 IGHV3-35A0A0C4DH35 117 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 A0A0D9SFI3 127 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 H0YJX3 145 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 KMOO15229 486 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 SLC31A2O15432 143 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 THY1P04216 161 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 RAB3BP20337 219 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 WARSP23381 471 aaKnown RBP4.61□□□□□ -1.67
BRCA1-224ENST00000497488 PAX6P26367 422 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 SLCO1A2P46721 670 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 OMPP47874 163 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 TTPAP49638 278 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 NDUFA8P51970 172 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 RUNX3Q13761 415 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 LRRC26Q2I0M4 334 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 CEACAM16Q2WEN9 425 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 ZFP69Q49AA0 526 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 PRR30Q53SZ7 412 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-224ENST00000497488 SPIN3Q5JUX0 258 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 STEAP4Q687X5 459 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 AWAT2Q6E213 333 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 RFLNAQ6ZTI6 216 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 FAM92BQ6ZTR7 304 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 GPD1LQ8N335 351 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 OR2G3Q8NGZ4 309 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 TEX47Q8TBZ9 253 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 HAVCR2Q8TDQ0 301 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 CASTOR1Q8WTX7 329 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 AP3S1Q92572 193 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 SEH1LQ96EE3 360 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 GALNT14Q96FL9 552 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 Q96MT0 163 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF778Q96MU6 729 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 RILPQ96NA2 401 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 ARHGDIGQ99819 225 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 DHRS9Q9BPW9 319 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 EBF4Q9BQW3 602 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 POLR2J2Q9GZM3 115 aaKnown RBP4.61□□□□□ -1.67
BRCA1-224ENST00000497488 SLC22A4Q9H015 551 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 POLR2J3Q9H1A7 115 aaKnown RBP4.61□□□□□ -1.67
BRCA1-224ENST00000497488 Q9H3A6 140 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 FAM206AQ9NX38 181 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 DNAJC27Q9NZQ0 273 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 V9GYQ6 96 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 PTPRFP10586 1907 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 MYH7P12883 1935 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 BRCA2P51587 3418 aa4.61□□□□□ -1.67
BRCA1-224ENST00000497488 TDRD15B5MCY1 1934 aaKnown RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 BAZ2AQ9UIF9 1905 aaKnown RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 H0Y9J4 135 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 TAAR5O14804 337 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms