RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 NGFP01138 241 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 PVALBP20472 110 aaPredicted RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 FPR2P25090 351 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 ACKR3P25106 362 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 EIF5AP63241 154 aaKnown RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 ELP2Q6IA86 826 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 HOGA1Q86XE5 327 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 ZNF808Q8N4W9 903 aaPredicted RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 NUP37Q8NFH4 326 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 GRPEL2Q8TAA5 225 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 PRR7Q8TB68 274 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 NICN1Q9BSH3 213 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 RAB1BQ9H0U4 201 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 UFSP2Q9NUQ7 469 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 KLK11Q9UBX7 282 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 Q9UFV3 132 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 RNF115Q9Y4L5 304 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 FAM215AQ9Y5M1 114 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 EXPH5Q8NEV8 1989 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 RAB27BO00194 218 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 SLC22A5O76082 557 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 PMP2P02689 132 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 CALCRP30988 508 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 EFNB2P52799 333 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 CELF2-AS1Q8N7Q2 184 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 WDR31Q8NA23 367 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 GALNT11Q8NCW6 608 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 THAP6Q8TBB0 222 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 MARVELD1Q9BSK0 173 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 ZNF319Q9P2F9 582 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 M0QYG6 137 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 AKR1C4P17516 323 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 ERP29P30040 261 aaKnown RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 TDGF1P3P51864 188 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 RAB14P61106 215 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 RAP2BP61225 183 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 CATR1Q13166 79 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 MICBQ29980 383 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 NR2C2APQ86WQ0 139 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 WDFY1Q8IWB7 410 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 HYLS1Q96M11 299 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 GFI1Q99684 422 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 SLC5A7Q9GZV3 580 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP54-215ENST00000497106 CA10Q9NS85 328 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 LPAR3Q9UBY5 353 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 KCNS2Q9ULS6 477 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 ZNF835Q9Y2P0 537 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 hCG_1809904A0A1W2PP81 198 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 A0A1W2PPE2 198 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 A0A1W2PR64 198 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 A0A1W2PRV1 198 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 SIRPB1O00241 398 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 WRBO00258 174 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 HRH1P35367 487 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 FOXG1P55316 489 aaPredicted RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 IL13RA1P78552 427 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 GUSBP1Q15486 140 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 VAX1Q5SQQ9 334 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 SLC36A1Q7Z2H8 476 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 OR5AP2Q8NGF4 316 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 OR10J5Q8NHC4 309 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 TERB2Q8NHR7 220 aa7.19□□□□□ -1.26
USP54-215ENST00000497106 UBE2J1Q9Y385 318 aaPredicted RBP7.19□□□□□ -1.26
USP54-215ENST00000497106 TRAV38-1A0A0B4J264 116 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 B9A039 149 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 SOCS1O15524 211 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 KNG1P01042 644 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 NTF4P34130 210 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 WNT5AP41221 380 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 CCR6P51684 374 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 CD83Q01151 205 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 FAM27E3Q08E93 113 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 ZNF324BQ6AW86 544 aaPredicted RBP7.18□□□□□ -1.26
USP54-215ENST00000497106 CASTOR1Q8WTX7 329 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 DPCDQ9BVM2 203 aaPredicted RBP7.18□□□□□ -1.26
USP54-215ENST00000497106 PRORYQ9H606 182 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 NUP50Q9UKX7 468 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 SSUH2Q9Y2M2 353 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 BRCA2P51587 3418 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 HS3ST1O14792 307 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 LDLRAD4O15165 306 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 NHLRC3Q5JS37 347 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 SHEQ5VZ18 495 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 DVL3Q92997 716 aaPredicted RBP7.18□□□□□ -1.26
USP54-215ENST00000497106 MUC6Q6W4X9 2439 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 ATP6V1G2-DDX39BF2Z307 99 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 F5H5P2 479 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 HAND1O96004 215 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 CGAP01215 116 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 IGLV1-44P01699 117 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 HLA-AP01891 365 aaKnown RBP7.18□□□□□ -1.26
USP54-215ENST00000497106 OR5H8P0DN80 308 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 CARTPTQ16568 116 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 ZNF431Q8TF32 576 aaPredicted RBP7.18□□□□□ -1.26
USP54-215ENST00000497106 TOMM40LQ969M1 308 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 PCDHB10Q9UN67 800 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 MPDZO75970 2070 aa7.18□□□□□ -1.26
USP54-215ENST00000497106 CD200P41217 278 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms