RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 HIKESHIQ53FT3 197 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 ELP2Q6IA86 826 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 TMEM211Q6ICI0 200 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DHRS11Q6UWP2 260 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 TMPRSS7Q7RTY8 843 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 POC1AQ8NBT0 407 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 SLAMF9Q96A28 289 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
GARNL3-220ENST00000496711 OR10C1Q96KK4 312 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 MICU1Q9BPX6 476 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 LIME1Q9H400 295 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 RASL12Q9NYN1 266 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4Q9UBX2 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 MEMO1Q9Y316 297 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 PTPRBP23467 1997 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 TEX13DA0A0J9YY54 714 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-220ENST00000496711 SPAARA0A1B0GVQ0 90 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 FAM221AA4D161 298 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-220ENST00000496711 HOXB5P09067 269 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF728P0DKX0 622 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 ZP3P21754 424 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 DAZAP2Q15038 168 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-220ENST00000496711 BATF2Q8N1L9 274 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-220ENST00000496711 TOMM40LQ969M1 308 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 RNF126Q9BV68 326 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 DOCK7Q96N67 2140 aa11.22□□□□□ -0.61
GARNL3-220ENST00000496711 CD300LBA8K4G0 201 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF732B4DXR9 585 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 H0YIZ8 118 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 GLP1RP43220 463 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 FGF12P61328 243 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 PMP22Q01453 160 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 PDCD1Q15116 288 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
GARNL3-220ENST00000496711 ASCL3Q9NQ33 180 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 KCNMB2Q9Y691 235 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF318Q5VUA4 2279 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
GARNL3-220ENST00000496711 CACNA1HO95180 2353 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 PRSS44E7EML9 344 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 NKX2-8O15522 239 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 NUP62P37198 522 aaPredicted RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 WNT5AP41221 380 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 PIGPP57054 158 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 IL15RAQ13261 267 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 RBM39Q14498 530 aaKnown RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 ABCA11PQ4W5N1 156 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 Q6ZPA2 131 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 P4HA3Q7Z4N8 544 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 MDP1Q86V88 176 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 MKXQ8IYA7 352 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 OR5A2Q8NGI9 324 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 STOML3Q8TAV4 291 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 EXTL1Q92935 676 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 RRNAD1Q96FB5 475 aaKnown RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 PIK3IP1Q96FE7 263 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 GMPPAQ96IJ6 420 aaPredicted RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 HIST1H2AAQ96QV6 131 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 C1QTNF6Q9BXI9 259 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.62
GARNL3-220ENST00000496711 NUP50Q9UKX7 468 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.62
GARNL3-220ENST00000496711 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 F8VVB4 439 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 F8VWA3 439 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 KCNAB3O43448 404 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 FGF2P09038 288 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 FCGR2CP31995 323 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 FXYD4P59646 89 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 SRSF6Q13247 344 aaKnown RBP11.2□□□□□ -0.62
GARNL3-220ENST00000496711 RAB32Q13637 225 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 SNTB1Q13884 538 aaKnown RBP11.2□□□□□ -0.62
GARNL3-220ENST00000496711 MPV17LQ2QL34 196 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 OR5L1Q8NGL2 311 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 MOB3AQ96BX8 217 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 NARFLQ9H6Q4 476 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 RCC2Q9P258 522 aaKnown RBP11.2□□□□□ -0.62
GARNL3-220ENST00000496711 MPC1Q9Y5U8 109 aa11.2□□□□□ -0.62
GARNL3-220ENST00000496711 OR5B21A6NL26 309 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 A8MXK9 166 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 ZNF205O95201 554 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 IFNA21P01568 189 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 IGHG3P01860 377 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 CCL11P51671 97 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 S100A10P60903 97 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 UNQ6126/PRO20091Q6UXV3 157 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 Q6ZS49 121 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms