RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 RNF141Q8WVD5 230 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 RRNAD1Q96FB5 475 aaKnown RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 MICU1Q9BPX6 476 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 SYT3Q9BQG1 590 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PIGMQ9H3S5 423 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 OR5AC2Q9NZP5 309 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF581Q9P0T4 197 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 WDFY4Q6ZS81 3184 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 PQLC2LA1A4F0 135 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 TAAR5O14804 337 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF806P0C7X5 589 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 FCGR2CP31995 323 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 BRICD5Q6PL45 260 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 DPPA2Q7Z7J5 298 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 ZDHHC23Q8IYP9 409 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 SAXO1Q8IYX7 474 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 Q8NFD4 153 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 DYRK2Q92630 601 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 GALNT14Q96FL9 552 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 HIST1H2AAQ96QV6 131 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 LDAHQ9H6V9 325 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 KNTC1P50748 2209 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CST4P01036 141 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 HOXD4P09016 255 aaPredicted RBP9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CCL2P13500 99 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 HAAOP46952 286 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 FXYD4P59646 89 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CEACAM21Q3KPI0 293 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF585AQ6P3V2 769 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 UQCC3Q6UW78 93 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 SLC38A6Q8IZM9 456 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 ZFP62Q8NB50 900 aaPredicted RBP9.55□□□□□ -0.88
CMSS1-208ENST00000496116 RTN4IP1Q8WWV3 396 aaPredicted RBP9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 SUCNR1Q9BXA5 334 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 LIME1Q9H400 295 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 CYTL1Q9NRR1 136 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 FAM86C1Q9NVL1 165 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 TUBD1Q9UJT1 453 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 STARD10Q9Y365 291 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 R4GN57 208 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 FREM1Q5H8C1 2179 aa9.55□□□□□ -0.88
CMSS1-208ENST00000496116 FREM2Q5SZK8 3169 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 FAM221AA4D161 298 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 NPBWR2P48146 333 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 GPM6AP51674 278 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
CMSS1-208ENST00000496116 UCP3P55916 312 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 GGNBP1Q5YKI7 109 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
CMSS1-208ENST00000496116 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM200AQ86VY9 491 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 CCDC71LQ8N9Z2 235 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 NANOS1Q8WY41 292 aaKnown RBP9.54□□□□□ -0.88
CMSS1-208ENST00000496116 MARC2Q969Z3 335 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 MOB3AQ96BX8 217 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 MARS2Q96GW9 593 aaKnown RBP9.54□□□□□ -0.88
CMSS1-208ENST00000496116 COQ3Q9NZJ6 369 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 PCDHB10Q9UN67 800 aa9.54□□□□□ -0.88
CMSS1-208ENST00000496116 RAB19A4D1S5 217 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 MSGN1A6NI15 193 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 FGF16O43320 207 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 SS18L1O75177 396 aaPredicted RBP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 APLNRP35414 380 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 FGF12P61328 243 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 HERV-K104P61576 105 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 ARG2P78540 354 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 PDCD1Q15116 288 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TFAP2EQ6VUC0 442 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 NUFIP2Q7Z417 695 aaKnown RBP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 FOXRED2Q8IWF2 684 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 STPG2Q8N412 459 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 BHLHE23Q8NDY6 225 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 SLAMF9Q96A28 289 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 SLC5A7Q9GZV3 580 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 ZFP57Q9NU63 452 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 DNAJC13O75165 2243 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TNRC6AQ8NDV7 1962 aaKnown RBP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 MED13Q9UHV7 2174 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF503-AS2A6NEH8 195 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TRAPPC2LH3BP13 241 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 K7EPK0 472 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 DEDDO75618 318 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 APOC3P02656 99 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 BCL3P20749 454 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 CLN3Q13286 438 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM187Q14656 261 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 C3AR1Q16581 482 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms