RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 STARD10Q9Y365 291 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 DOCK7Q96N67 2140 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 ASPMQ8IZT6 3477 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 SNCAP37840 140 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 NPBWR2P48146 333 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 SUCLG1P53597 346 aaKnown RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 DAZAP2Q15038 168 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 IGSF11Q5DX21 431 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 LYSMD4Q5XG99 296 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 IFI44Q8TCB0 444 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 GALNT14Q96FL9 552 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 TP53RKQ96S44 253 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 WDR54Q9H977 334 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 PLEKHA2Q9HB19 425 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 FAM212BQ9NTI7 297 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-217ENST00000495688 TMEM38BQ9NVV0 291 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 TIMM10BQ9Y5J6 103 aa11.27□□□□□ -0.61
PTPN7-217ENST00000495688 TERTO14746 1132 aaKnown RBP11.26□□□□□ -0.61
PTPN7-217ENST00000495688 CXCL13O43927 109 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 F10P00742 488 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 FGF5P12034 268 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 CBR1P16152 277 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 DTYMKP23919 212 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 RGS19P49795 217 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 CNN3Q15417 329 aaKnown RBP11.26□□□□□ -0.61
PTPN7-217ENST00000495688 AWAT1Q58HT5 328 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 PIGCQ92535 297 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 C18orf12Q96KH6 178 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SH2D2AQ9NP31 389 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 KLK3P07288 261 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-217ENST00000495688 DANCRP0C864 163 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 AADACP22760 399 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 GUK1Q16774 197 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SLC23A3Q6PIS1 610 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF700Q9H0M5 742 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SPACA1Q9HBV2 294 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 SMCO4Q9NRQ5 59 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
PTPN7-217ENST00000495688 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
PTPN7-217ENST00000495688 OR6C6A6NF89 314 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 H7C1Q1 480 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 CBR3O75828 277 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 OR7C1O76099 320 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-217ENST00000495688 PRH1P02810 166 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 CAMLGP49069 296 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 CARD18P57730 90 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 RAC3P60763 192 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 RPS18P62269 152 aaKnown RBP11.25□□□□□ -0.61
PTPN7-217ENST00000495688 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 PLCXD3Q63HM9 321 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 GGNQ86UU5 652 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 OR14L1PQ8NHC6 308 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 FBXO7Q9Y3I1 522 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 NSG1A0A0A6YYJ2 146 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF716A6NP11 495 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 SLC33A1O00400 549 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-217ENST00000495688 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPN7-217ENST00000495688 TMEM42Q69YG0 159 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 LHFPL2Q6ZUX7 228 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 AGBL5Q8NDL9 886 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 INTS12Q96CB8 462 aaKnown RBP11.25□□□□□ -0.61
PTPN7-217ENST00000495688 WNT5BQ9H1J7 359 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF442Q9H7R0 627 aa11.25□□□□□ -0.61
PTPN7-217ENST00000495688 hCG_38984A0A1B0GV85 526 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 A0A1W2PPE3 182 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 C7orf77A4D0Y5 90 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 M0R036 132 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 CST2P09228 141 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 SPINK2P20155 84 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 DUSP1P28562 367 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
PTPN7-217ENST00000495688 P2RY1P47900 373 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 EXT1Q16394 746 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ASCL4Q6XD76 172 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 AAED1Q7RTV5 226 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 SKA3Q8IX90 412 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ABHD3Q8WU67 409 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 HS3ST6Q96QI5 342 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 FOXB1Q99853 325 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
PTPN7-217ENST00000495688 BCO1Q9HAY6 547 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 KPTNQ9Y664 436 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 A6NLC8 198 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 GPR137BO60478 399 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms