RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 ZFP41Q8N8Y5 198 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 CT45A3Q8NHU0 189 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 PIGXQ8TBF5 258 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 APH1BQ8WW43 257 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 TFGQ92734 400 aaPredicted RBP2.55□□□□□ -2
NCKAP1-208ENST00000495619 PTH2Q96A98 100 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 APH1AQ96BI3 265 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 PPWD1Q96BP3 646 aaKnown RBP2.55□□□□□ -2
NCKAP1-208ENST00000495619 TCEAL4Q96EI5 215 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 ZNF75AQ96N20 296 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 OR5B12Q96R08 314 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 MICU1Q9BPX6 476 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 SEC22CQ9BRL7 303 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 TIPINQ9BVW5 301 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 MRPS26Q9BYN8 205 aaKnown RBP2.55□□□□□ -2
NCKAP1-208ENST00000495619 PCBD2Q9H0N5 130 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 ALX4Q9H161 411 aaPredicted RBP2.55□□□□□ -2
NCKAP1-208ENST00000495619 SYT4Q9H2B2 425 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 C11orf49Q9H6J7 331 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 SLC2A9Q9NRM0 540 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 GUCA1BQ9UMX6 200 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 NDRG2Q9UN36 371 aaKnown RBP2.55□□□□□ -2
NCKAP1-208ENST00000495619 ARL2BPQ9Y2Y0 163 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 ZNF337Q9Y3M9 751 aa2.55□□□□□ -2
NCKAP1-208ENST00000495619 ANKRD12Q6UB98 2062 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SCN1AP35498 2009 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 AQRO60306 1485 aaKnown RBP eCLIP2.54□□□□□ -2
NCKAP1-208ENST00000495619 ZFYVE9O95405 1425 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 EIF3AQ14152 1382 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 KIF24Q5T7B8 1368 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 ZNF532Q9HCE3 1301 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 A0A1W2PRF3 423 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 A0A1W2PRM7 423 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 C9J4A7 227 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 ATP6V1G2-DDX39BF2Z307 99 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 F8W036 122 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 hCG_2039718K7EN88 272 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 M0QZ92 97 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 M0QZK8 103 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 PRMT5O14744 637 aaPredicted RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 TGOLN2O43493 480 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SGCEO43556 437 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 FKBP6O75344 327 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 CCNE2O96020 404 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 HLA-HP01893 362 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 UCHL3P15374 230 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 IVDP26440 423 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 HCAR3P49019 387 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 TMEM33P57088 247 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 PSPHP78330 225 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 PRR3P79522 188 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 SEMG2Q02383 582 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SRSF6Q13247 344 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 RAB31Q13636 194 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SPA17Q15506 151 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 PDZD11Q5EBL8 140 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SDHAF4Q5VUM1 108 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 APOBEC3HQ6NTF7 200 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 DNM1P34Q6PK57 102 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 C4orf22Q6V702 233 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 MBOAT1Q6ZNC8 495 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SSX7Q7RTT5 188 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SSX6Q7RTT6 188 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 CMC1Q7Z7K0 106 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 UNC93AQ86WB7 457 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 DHFR2Q86XF0 187 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 LFNGQ8NES3 379 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 ATP6V1C2Q8NEY4 427 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 OR4K2Q8NGD2 314 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 OR10AD1Q8NGE0 317 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 OR11L1Q8NGX0 322 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 RNASEH2CQ8TDP1 164 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 NEURL3Q96EH8 262 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SGTBQ96EQ0 304 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 RILPQ96NA2 401 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 XPO6Q96QU8 1125 aaKnown RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 STACQ99469 402 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 TIMM17AQ99595 171 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 HOPXQ9BPY8 73 aaPredicted RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 UCK2Q9BZX2 261 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 ZSCAN16Q9H4T2 348 aaPredicted RBP2.54□□□□□ -2
NCKAP1-208ENST00000495619 FGFR1OP2Q9NVK5 253 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 RMND1Q9NWS8 449 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 MAT2BQ9NZL9 334 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SLC17A4Q9Y2C5 497 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 ARL5AQ9Y689 179 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 SLC22A7Q9Y694 548 aa2.54□□□□□ -2
NCKAP1-208ENST00000495619 NUP160Q12769 1436 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 CNTLNQ9NXG0 1405 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 YEATS2Q9ULM3 1422 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 CCNB3Q8WWL7 1395 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 USP42Q9H9J4 1324 aaKnown RBP2.53□□□□□ -2
NCKAP1-208ENST00000495619 VPS37CA5D8V6 355 aaPredicted RBP2.53□□□□□ -2
NCKAP1-208ENST00000495619 LINC00587B1AMM8 73 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 PSMD12O00232 456 aaPredicted RBP2.53□□□□□ -2
NCKAP1-208ENST00000495619 TCAPO15273 167 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 CST8O60676 142 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 PLEKHA8P1O95397 391 aa2.53□□□□□ -2
NCKAP1-208ENST00000495619 IFNA21P01568 189 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms