RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 C10orf128Q5T292 105 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 LCN1P1Q5VSP4 162 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 CORO6Q6QEF8 472 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 AHSA2Q719I0 299 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SLC16A9Q7RTY1 509 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 DPY19L4Q7Z388 723 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 LINC00346Q8IVM7 164 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SLC22A24Q8N4F4 322 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SIGLECL1Q8N7X8 197 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SLC26A10Q8NG04 563 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 OR2AJ1Q8NGZ0 328 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SYNPRQ8TBG9 265 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 MYDGFQ969H8 173 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 RAB39BQ96DA2 213 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 LGALS12Q96DT0 336 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 TMEM80Q96HE8 168 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 C1orf147Q96MC9 270 aaPredicted RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 COPS4Q9BT78 406 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 DUSP21Q9H596 190 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 RNF121Q9H920 327 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SIAEQ9HAT2 523 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 POLE4Q9NR33 117 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 TMEM38BQ9NVV0 291 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 MRPL22Q9NWU5 206 aaKnown RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 NKIRAS2Q9NYR9 191 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 UGT2A1Q9Y4X1 527 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 IGHV1-69-2A0A0G2JMI3 117 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 DAPL1A0PJW8 107 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 C12orf71A8MTZ7 269 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CLDN25C9JDP6 229 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 FADS2O95864 444 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 CDK1P06493 297 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 LYNP07948 512 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CST2P09228 141 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CCDC159P0C7I6 412 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 FAM106CPP0CH98 169 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 MSR1P21757 451 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 PRTN3P24158 256 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 SLC15A1P46059 708 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 ETV1P50549 477 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 MFAP4P55083 255 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 UCP2P55851 309 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 KLF3P57682 345 aaPredicted RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 LCN2P80188 198 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 ARL16Q0P5N6 197 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 RAB40BQ12829 278 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 EIF2B1Q14232 305 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 HFEQ30201 348 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 RBMS3Q6XE24 437 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 FOXL2NBQ6ZUU3 175 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 KCTD8Q6ZWB6 473 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 SLC16A14Q7RTX9 510 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 SLC35F2Q8IXU6 374 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 TIGD4Q8IY51 512 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 MUC20Q8N307 709 aaPredicted RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 ACBD7Q8N6N7 88 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 SLC30A7Q8NEW0 376 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 OR10H4Q8NGA5 316 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 OR6N2Q8NGY6 317 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 OR52I2Q8NH67 350 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CCL17Q92583 94 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 RAB1CQ92928 201 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 NABP1Q96AH0 204 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 INTS14Q96SY0 518 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CNN2Q99439 309 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 NEURL2Q9BR09 285 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 TTTY10Q9BZA0 68 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 YIPF3Q9GZM5 350 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 MARCH7Q9H992 704 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CDH20Q9HBT6 801 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 ADGRL4Q9HBW9 690 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 FGF20Q9NP95 211 aaPredicted RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 MMP26Q9NRE1 261 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CENPMQ9NSP4 180 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 PAK1IP1Q9NWT1 392 aaPredicted RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 CHCHD3Q9NX63 227 aaKnown RBP5.31□□□□□ -1.56
VIM-207ENST00000495528 SLCO1C1Q9NYB5 712 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 CLEC2DQ9UHP7 191 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 KCNG2Q9UJ96 466 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 LAMP5Q9UJQ1 280 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 FBXL3Q9UKT7 428 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 COMMD3-BMI1R4GMX3 469 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 ARHGAP32A7KAX9 2087 aa5.31□□□□□ -1.56
VIM-207ENST00000495528 WNK2Q9Y3S1 2297 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 A0A1W2PP11 408 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 A0A1W2PQ09 198 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 A0A1W2PQL4 384 aaPredicted RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 IRGMA1A4Y4 181 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ZNF670-ZNF695F2Z2N8 137 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 TRAPPC2LH3BP13 241 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 J3QLW9 94 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 J3QR06 171 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 J3QRE1 110 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 RER1O15258 196 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 FARS2O95363 451 aaKnown RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 TNFAIP8O95379 198 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms