RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	MIDN	Q504T8	468 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	RPL22L1	Q6P5R6	122 aa	Known RBP	10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	TMPRSS11A	Q6ZMR5	421 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	GDPD3	Q7L5L3	318 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	SERPINA12	Q8IW75	414 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	SAXO1	Q8IYX7	474 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	C11orf42	Q8N5U0	333 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	TSEN15	Q8WW01	171 aa	Known RBP	10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	SNX22	Q96L94	193 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	DPAGT1	Q9H3H5	408 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	IL36RN	Q9UBH0	155 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	DHDH	Q9UQ10	334 aa		10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	SF3B6	Q9Y3B4	125 aa	Known RBP	10.89	□□□□□ -0.67
RBM28-208	ENST00000495327	IGKV1-12	A0A0C4DH73	117 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327		A0A1B0GUS0	222 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	POM121C	A8CG34	1229 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	C17orf98	A8MV24	154 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	SPRY1	O43609	319 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	ANGPTL7	O43827	346 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	IGKV1D-12	P01611	117 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	CCL3L1	P16619	93 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	PRKACA	P17612	351 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	MYL12A	P19105	171 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	CAPG	P40121	348 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	DLX6	P56179	175 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	ERVFRD-1	P60508	538 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	XAF1	Q6GPH4	301 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF529	Q6P280	563 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	SHISA2	Q6UWI4	295 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	C17orf107	Q6ZR85	190 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	PNKD	Q8N490	385 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	BEND2	Q8NDZ0	799 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	OR4M1	Q8NGD0	313 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	OR5D14	Q8NGL3	314 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	OR52N1	Q8NH53	320 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	RGP1	Q92546	391 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	RFT1	Q96AA3	541 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	CPNE2	Q96FN4	548 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	SPACA5	Q96QH8	159 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	HEXA-AS1	Q9H8Q6	139 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	HMG20A	Q9NP66	347 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	TNFRSF19	Q9NS68	423 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	C1RL	Q9NZP8	487 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327	VPREB3	Q9UKI3	123 aa		10.88	□□□□□ -0.67
RBM28-208	ENST00000495327		A0A1W2PRD5	423 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327		A0A1W2PRF3	423 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327		A0A1W2PRM7	423 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	TMEM82	A0PJX8	343 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	GPR137B	O60478	399 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	INMT	O95050	263 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	PAH	P00439	452 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	CRYBA1	P05813	215 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	HCK	P08631	526 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	PIP	P12273	146 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	MDK	P21741	143 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	GTF2A1	P52655	376 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	RAG2	P55895	527 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	EDDM3B	P56851	147 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	ZP1	P60852	638 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	RELB	Q01201	579 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	MEF2C	Q06413	473 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	MED21	Q13503	144 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	KISS1	Q15726	138 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	TAF9	Q16594	264 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	OR2G6	Q5TZ20	316 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	GDPGP1	Q6ZNW5	385 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	TCF23	Q7RTU1	214 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	OR5D18	Q8NGL1	313 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	OR4F5	Q8NH21	305 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	OR5R1	Q8NH85	324 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	SGMS2	Q8NHU3	365 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	GPR148	Q8TDV2	347 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	FBLIM1	Q8WUP2	373 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	SMIM19	Q96E16	107 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	TMEM80	Q96HE8	168 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	VCX	Q9H320	206 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	DCLRE1B	Q9H816	532 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	GLS2	Q9UI32	602 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	LINC00312	Q9Y6C7	94 aa		10.87	□□□□□ -0.67
RBM28-208	ENST00000495327	BTBD17	A6NE02	478 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	MGST3	O14880	152 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	OGG1	O15527	345 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	PSPN	O60542	156 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	CD2	P06729	351 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	GNAO1	P09471	354 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF728	P0DKX0	622 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	RAB3A	P20336	220 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	GABRR1	P24046	479 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	ERP29	P30040	261 aa	Known RBP	10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	OR3A1	P47881	315 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	GRK1	Q15835	563 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	ASPHD2	Q6ICH7	369 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	RNF144B	Q7Z419	303 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF485	Q8NCK3	441 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	OR52N4	Q8NGI2	321 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	PPP1R35	Q8TAP8	253 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	TAF15	Q92804	592 aa	Known RBP eCLIP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms