RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ELMOD2Q8IZ81 293 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 CREB3L1Q96BA8 519 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 LRGUKQ96M69 825 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
VARS-228ENST00000495010 ARL8BQ9NVJ2 186 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 COPS3Q9UNS2 423 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 UBE2J1Q9Y385 318 aaPredicted RBP11.34□□□□□ -0.59
VARS-228ENST00000495010 SNX5Q9Y5X3 404 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 R4GMQ9 66 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 RYR3Q15413 4870 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 TRGV10A0A0A0MS01 117 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 F8VVB4 439 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 F8VWA3 439 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 MGST3O14880 152 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 GATBO75879 557 aaKnown RBP11.33□□□□□ -0.6
VARS-228ENST00000495010 MMP23AO75900 390 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 CYB5AP00167 134 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 IGHA1P01876 353 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 RAP2AP10114 183 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 MYCNOSP40205 109 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 FUT6P51993 359 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
VARS-228ENST00000495010 BDH1Q02338 343 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 KPNB1Q14974 876 aaKnown RBP11.33□□□□□ -0.6
VARS-228ENST00000495010 PRAMEF5Q5TYX0 476 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 ZNF322Q6U7Q0 402 aaPredicted RBP11.33□□□□□ -0.6
VARS-228ENST00000495010 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 SLC25A26Q70HW3 274 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 Q8IYB0 196 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 OR52N4Q8NGI2 321 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 BORCS8Q96FH0 119 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 CNN2Q99439 309 aaKnown RBP11.33□□□□□ -0.6
VARS-228ENST00000495010 APOL4Q9BPW4 351 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 TVP23BQ9NYZ1 205 aa11.33□□□□□ -0.6
VARS-228ENST00000495010 A0A1B0GTI1 187 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 FUOMA2VDF0 154 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 PRR32B1ATL7 298 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 SNX3O60493 162 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 RAMP3O60896 148 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 SERPINA3P01011 423 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 FAM106CPP0CH98 169 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 CDK2P24941 298 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
VARS-228ENST00000495010 SLC6A1P30531 599 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 PRRX1P54821 245 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 P2RX3P56373 397 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 RAB25P57735 213 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 CXCR4P61073 352 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
VARS-228ENST00000495010 RBM39Q14498 530 aaKnown RBP11.32□□□□□ -0.6
VARS-228ENST00000495010 ODF4Q2M2E3 257 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 CHPT1Q8WUD6 406 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 ZFP57Q9NU63 452 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 H2AFY2Q9P0M6 372 aaPredicted RBP11.32□□□□□ -0.6
VARS-228ENST00000495010 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 HSPE1-MOB4S4R3N1 261 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
VARS-228ENST00000495010 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 ZNF670-ZNF695F2Z2N8 137 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 MAGEB4O15481 346 aaPredicted RBP11.31□□□□□ -0.6
VARS-228ENST00000495010 SYT7O43581 403 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 SRSF10O75494 262 aaKnown RBP11.31□□□□□ -0.6
VARS-228ENST00000495010 AMY1AP04745 511 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 AMY2AP04746 511 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 DUSP1P28562 367 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 GP2P55259 537 aaKnown RBP11.31□□□□□ -0.6
VARS-228ENST00000495010 SNU13P55769 128 aaKnown RBP11.31□□□□□ -0.6
VARS-228ENST00000495010 SLC35B1P78383 322 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 ZNF91Q05481 1191 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 HEPN1Q6WQI6 88 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 OR2W3Q7Z3T1 314 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 ARHGAP24Q8N264 748 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 MNTQ99583 582 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 SEBOXQ9HB31 216 aaPredicted RBP11.31□□□□□ -0.6
VARS-228ENST00000495010 SLC25A19Q9HC21 320 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 HHLA2Q9UM44 414 aa11.31□□□□□ -0.6
VARS-228ENST00000495010 IGKV1-27A0A075B6S5 117 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 H0YHG0 523 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 H3BSH0 61 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 SIRPB1O00241 398 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 PSPNO60542 156 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 RPP14O95059 124 aaKnown RBP11.3□□□□□ -0.6
VARS-228ENST00000495010 ZFPL1O95159 310 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 ANXA8P13928 327 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms