RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MPV17LQ2QL34 196 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 SPIN3Q5JUX0 258 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A1Q86YD7 464 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 C1orf87Q8N0U7 546 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 BOLLQ8N9W6 283 aaKnown RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 OR4M2Q8NGB6 313 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 OR10R2Q8NGX6 335 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CCL19Q99731 98 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 TMEM106BQ9NUM4 274 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 TREM2Q9NZC2 230 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 RABL2AQ9UBK7 228 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 RABL2BQ9UNT1 228 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CACNG2Q9Y698 323 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CELSR2Q9HCU4 2923 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 DOPEY2Q9Y3R5 2298 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 CHD3Q12873 2000 aaKnown RBP9.58□□□□□ -0.88
MCF2L-231ENST00000494043 TRAV18A0A075B6X5 111 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 TMEM178BH3BS89 294 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 OR7C1O76099 320 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-231ENST00000494043 KNG1P01042 644 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 DUSP1P28562 367 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 BLVRBP30043 206 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-231ENST00000494043 CD80P33681 288 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 TMEM50BP56557 158 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 MRPS11P82912 194 aaKnown RBP9.58□□□□□ -0.88
MCF2L-231ENST00000494043 IKZF1Q13422 519 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF146Q15072 292 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 HFEQ30201 348 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 PLAC9Q5JTB6 97 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 SIGIRRQ6IA17 410 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 PYHIN1Q6K0P9 492 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 CHST4Q8NCG5 386 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 CCL17Q92583 94 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 YIPF5Q969M3 257 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 MARVELD3Q96A59 401 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 RAB3CQ96E17 227 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 SEH1LQ96EE3 360 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 AUNIPQ9H7T9 357 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 IFT22Q9H7X7 185 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 DCAF16Q9NXF7 216 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF581Q9P0T4 197 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 NLKQ9UBE8 527 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
MCF2L-231ENST00000494043 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
MCF2L-231ENST00000494043 ASH1LQ9NR48 2969 aaKnown RBP9.57□□□□□ -0.88
MCF2L-231ENST00000494043 TANC2Q9HCD6 1990 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 IGHV3OR15-7A0A075B7D8 119 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 MFNGO00587 321 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PDCD6O75340 191 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 RP2O75695 350 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 HAND1O96004 215 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 HLA-DQB1P01920 261 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 HIST1H1DP16402 221 aaKnown RBP9.57□□□□□ -0.88
MCF2L-231ENST00000494043 CHATP28329 748 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PITPNAQ00169 270 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PDCD1Q15116 288 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PYDC2Q56P42 97 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 NKAPLQ5M9Q1 402 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 FAM201AQ5SY85 155 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 TEX36Q5VZQ5 186 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 Q6P435 159 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 RTN4RL2Q86UN3 420 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 SNX29P2Q8IUI4 249 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 C15orf40Q8WUR7 153 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 RDH5Q92781 318 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 ARHGAP5-AS1Q96IT6 56 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 NEDD4LQ96PU5 975 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 ABHD1Q96SE0 405 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PECRQ9BY49 303 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 SRRQ9GZT4 340 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 CXorf56Q9H5V9 222 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 DLL4Q9NR61 685 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 RCC2Q9P258 522 aaKnown RBP9.57□□□□□ -0.88
MCF2L-231ENST00000494043 GLS2Q9UI32 602 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 HSF4Q9ULV5 492 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 PLEKHA6Q9Y2H5 1048 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
MCF2L-231ENST00000494043 OOEPA6NGQ2 149 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 RFPL4AA6NLU0 287 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 OR2AT4A6NND4 320 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 RFPL4AL1F8VTS6 287 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 LYNX1G3V0Z9 82 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 H3BUI4 141 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 J3QRK9 145 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 LGALS8O00214 317 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 SH2D1BO14796 132 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 CTDSPLO15194 276 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 LY6HO94772 140 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 OR2H2O95918 312 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 LYNX1P0DP58 116 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 PSG2P11465 335 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 DAOP14920 347 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF44P15621 663 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 MUC1P15941 1255 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 GNB3P16520 340 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 FUT3P21217 361 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 COL8A2P25067 703 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms