RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 WDR25Q64LD2 544 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 PTCRAQ6ISU1 281 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 MAVSQ7Z434 540 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 BEND2Q8NDZ0 799 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 BAHD1Q8TBE0 780 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 LRRC29Q8WV35 223 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 C1RLQ9NZP8 487 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RABAC1Q9UI14 185 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 MROH2AA6NES4 1674 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 IGHV3-43A0A0B4J1X8 118 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 B4E171 279 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 TNFSF15O95150 251 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 MPC2O95563 127 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 HBZP02008 142 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 FAM157CP0CG43 387 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 IGHV3-43DP0DP04 118 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 TWIST1Q15672 202 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 STXBP6Q8NFX7 210 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 PARD6GQ9BYG4 376 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 BCL2L10Q9HD36 194 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 FAM157AC9JC47 383 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 TSPAN12O95859 305 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 RNPS1Q15287 305 aaKnown RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 CCSMST1Q4G0I0 132 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 FBXL6Q8N531 539 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 C16orf52Q8NHV5 167 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OTOSQ8NHW6 89 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 R3HDM4Q96D70 268 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 MVB12AQ96EY5 273 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 LRRC3BQ96PB8 259 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 TIMP4Q99727 224 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ASCL3Q9NQ33 180 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 CA10Q9NS85 328 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR2W1Q9Y3N9 320 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ROBO1Q9Y6N7 1651 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 LOC389332A0A1B0GUA5 103 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 MED19A0JLT2 244 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 GEMIN2O14893 280 aaKnown RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR5AC1P0C628 307 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF83P51522 516 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 PLAURQ03405 335 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 FUNDC1Q8IVP5 155 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 FAM219AQ8IW50 185 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ALKBH3Q96Q83 286 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 HIST1H4GQ99525 98 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM38BQ9NVV0 291 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 HCFC2Q9Y5Z7 792 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 RBFOX2O43251 390 aaKnown RBP eCLIP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 DNAL4O96015 105 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 CA6P23280 308 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF137PP52743 207 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 DHRS2Q13268 280 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 COL19A1Q14993 1142 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 LRRC75AQ8NAA5 344 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR11G2Q8NGC1 345 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR8B3Q8NGG8 313 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 RAB1CQ92928 201 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ORAI1Q96D31 301 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 OR8B2Q96RD0 313 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 DOK1Q99704 481 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 KAT6AQ92794 2004 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ALG1L2C9J202 215 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 MAS1LP35410 378 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 HTRA3P83110 453 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 ROM1Q03395 351 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 KISS1Q15726 138 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 C12orf54Q6X4T0 127 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 MUC20Q8N307 709 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 CCL17Q92583 94 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 SPAG8Q99932 426 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-221ENST00000493795 SLC26A1Q9H2B4 701 aa7.01□□□□□ -1.29
BRCA1-221ENST00000493795 A0A087WUJ7 227 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CXorf1O96002 111 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ARG1P05089 322 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 KCNMB1Q16558 191 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 PYCR3Q53H96 274 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM207Q6UWW9 146 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 PNPLA5Q7Z6Z6 429 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 OR4X1Q8NH49 305 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 RFESDQ8TAC1 157 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TM4SF19Q96DZ7 209 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TEX37Q96LM6 180 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 RAXQ9Y2V3 346 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 COL1A1P02452 1464 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 TRGV5A0A0B4J1U4 118 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CDC14BO60729 498 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CACNG7P62955 275 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ST3GAL2Q16842 350 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM136Q6ZRR5 245 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF441Q8N8Z8 693 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 A0A1B0GV72 72 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 PPP1R17O96001 155 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ZGLP1P0C6A0 271 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CDX1P47902 265 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms