RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SLC16A6O15403 523 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ENTPD6O75354 484 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 KDM4BO94953 1096 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 APOL3O95236 402 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 HAND1O96004 215 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 IGKV1D-12P01611 117 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 IGHA1P01876 353 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 CSN2P05814 226 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 CSF1P09603 554 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ATF1P18846 271 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 PRKACBP22694 351 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 COX7A1P24310 79 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 CD34P28906 385 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 OR3A1P47881 315 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 RBP2P50120 134 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 RAB13P51153 203 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ATP1B3P54709 279 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 LGALS4P56470 323 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 OR12D2P58182 307 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ACTC1P68032 377 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ACTA1P68133 377 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 CNN3Q15417 329 aaKnown RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ODF4Q2M2E3 257 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 TP53I3Q53FA7 332 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 SAMD5Q5TGI4 173 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 MEDAGQ5VYS4 303 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF782Q6ZMW2 699 aaPredicted RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 Q6ZTK2 550 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 GDPD3Q7L5L3 318 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 SAXO1Q8IYX7 474 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 FAM58AQ8N1B3 248 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 KLHDC1Q8N7A1 406 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 OR4S1Q8NGB4 309 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 RPS4Y2Q8TD47 263 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 SPSB1Q96BD6 273 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 PELI1Q96FA3 418 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 BORCS8Q96FH0 119 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF714Q96N38 554 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ADI1Q9BV57 179 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 COMMD4Q9H0A8 199 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 RIBC2Q9H4K1 309 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 PLEKHA1Q9HB21 404 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 HMG20AQ9NP66 347 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 MRPS18AQ9NVS2 196 aaKnown RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 RBFOX1Q9NWB1 397 aaKnown RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 IL36RNQ9UBH0 155 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 GNG8Q9UK08 70 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 FOXJ3Q9UPW0 622 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 UBE2J1Q9Y385 318 aaPredicted RBP6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 A0A087X0M5 115 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 IGHV2-26A0A0B4J1V2 119 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 A0A1B0GX30 115 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 LY6LH3BQJ8 138 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 MMP23AO75900 390 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 IGLV1-47P01700 117 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ARG1P05089 322 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 CGB3P0DN86 165 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 CGB7P0DN87 165 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 PIPP12273 146 aaPredicted RBP6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 BCL3P20749 454 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 AZGP1P25311 298 aaKnown RBP6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 PEX2P28328 305 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ATP6V1E1P36543 226 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ALDH3A2P51648 485 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 MTCP1P56278 107 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 P2RX3P56373 397 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 EDDM3BP56851 147 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ACTA2P62736 377 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ACTG2P63267 376 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 BDH1Q02338 343 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 PAX5Q02548 391 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 SSX2Q16385 188 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF529Q6P280 563 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 Q6P435 159 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 HEPN1Q6WQI6 88 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 Q6ZS46 218 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ZBTB49Q6ZSB9 765 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 LHFPL2Q6ZUX7 228 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 RNF144BQ7Z419 303 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 BATF2Q8N1L9 274 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 SYS1Q8N2H4 156 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 PARP16Q8N5Y8 322 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 ACBD7Q8N6N7 88 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 Q8NFD4 153 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 OR51A4Q8NGJ6 313 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 OR4P4Q8NGL7 312 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 OR10AC1Q8NH08 325 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 RHOXF1Q8NHV9 184 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 FAM110DQ8TAY7 271 aaPredicted RBP6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 EMG1Q92979 244 aaKnown RBP6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 FGGYQ96C11 551 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 OCSTAMPQ9BR26 566 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 TMEM133Q9H2Q1 129 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 NCOR1P1Q9H4R4 102 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 LINC00574Q9H8X3 128 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 TAS2R3Q9NYW6 316 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 PITPNC1Q9UKF7 332 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 HHLA2Q9UM44 414 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1313.8 ms