RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 CFDP00746 253 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 CSN2P05814 226 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 CRHP06850 196 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 SFTPBP07988 381 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FCGR3AP08637 254 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FAM87AP0C7U9 286 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 SSTR2P30874 369 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 APLNRP35414 380 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FGF12P61328 243 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 SORDQ00796 357 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 TGFBR3Q03167 851 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 PRDX4Q13162 271 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 TAF9Q16594 264 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 MPV17LQ2QL34 196 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 PLEKHN1Q494U1 663 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 C11orf87Q6NUJ2 197 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 TFAP2EQ6VUC0 442 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FAM214BQ7L5A3 538 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 MRPL21Q7Z2W9 205 aaKnown RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 VASH2Q86V25 355 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 CALHM1Q8IU99 346 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 MKXQ8IYA7 352 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FBXL14Q8N1E6 418 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 C1orf162Q8NEQ5 155 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 OR51F2Q8NH61 342 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 COQ8AQ8NI60 647 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 ANGPTL6Q8NI99 470 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 SCARB1Q8WTV0 552 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 HPSE2Q8WWQ2 592 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 OR5P3Q8WZ94 311 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 WNT2BQ93097 391 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 PIK3IP1Q96FE7 263 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 CMSS1Q9BQ75 279 aaKnown RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 SULT4A1Q9BR01 284 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 FGF23Q9GZV9 251 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 PLK3Q9H4B4 646 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 ELL3Q9HB65 397 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 COMMD9Q9P000 198 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 AK3Q9UIJ7 227 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 ST3GAL6Q9Y274 331 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 STARD10Q9Y365 291 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 UBR5O95071 2799 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 ARHGAP21Q5T5U3 1957 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 IGKV1D-8A0A087WSZ0 117 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ZNF850A8MQ14 1090 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 GEMIN2O14893 280 aaKnown RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 TSC22D2O75157 780 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 RP2O75695 350 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ACAA1P09110 424 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 ZNF14P17017 642 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 WT1P19544 449 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 GABRR1P24046 479 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 WNT5AP41221 380 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 AP2S1P53680 142 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 RAB14P61106 215 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 C3AR1Q16581 482 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 TBR1Q16650 682 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 FAM76BQ5HYJ3 339 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 C1QTNF12Q5T7M4 302 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 GSG1LQ6UXU4 331 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 Q6ZT83 130 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ACOT7LQ6ZUV0 252 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ZNF546Q86UE3 836 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ZNF611Q8N823 705 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 FAM169BQ8N8A8 192 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 SARAFQ96BY9 339 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 GALNT14Q96FL9 552 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 FAAP24Q9BTP7 215 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 MFFQ9GZY8 342 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 RIMS4Q9H426 269 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 NECAP2Q9NVZ3 263 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 EHFQ9NZC4 300 aa9.22□□□□□ -0.93
USP4-214ENST00000491791 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
USP4-214ENST00000491791 RNF222A6NCQ9 220 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 AHRRA9YTQ3 701 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 ARPC5O15511 151 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 NAPSAO96009 420 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 NGFP01138 241 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 OR5H8P0DN80 308 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 RRASP10301 218 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 CD79AP11912 226 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 AKR1C4P17516 323 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 COX5AP20674 150 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 PSMB6P28072 239 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 NPY4RP50391 375 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 CCL11P51671 97 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 IL24Q13007 206 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 SRSF6Q13247 344 aaKnown RBP9.21□□□□□ -0.94
USP4-214ENST00000491791 IL13RA2Q14627 380 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 GABRA6Q16445 453 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 DMRTC1Q5HYR2 192 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 OR2A2Q6IF42 318 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 MYO7BQ6PIF6 2116 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 OR8H3Q8N146 312 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 LRTM2Q8N967 370 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 PPP1R1CQ8WVI7 109 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 PHYHIPLQ96FC7 376 aa9.21□□□□□ -0.94
USP4-214ENST00000491791 VRK1Q99986 396 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms