RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 DMBX1Q8NFW5 382 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 VOPP1Q96AW1 172 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 SHDQ96IW2 340 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 RSPO3Q9BXY4 272 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 PRRG4Q9BZD6 226 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 MRPL37Q9BZE1 423 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 C2orf72A6NCS6 295 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 C9J4A7 227 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 SOD3P08294 240 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 THBS4P35443 961 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 ELOBQ15370 118 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 MST1LQ2TV78 715 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 WDR25Q64LD2 544 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 EDARADDQ8WWZ3 215 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 ANAPC16Q96DE5 110 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 ATP5SQ99766 215 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 WBP1LQ9NX94 342 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 DHRS7CA6NNS2 312 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 PRR32B1ATL7 298 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 RAC2P15153 192 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 COX5AP20674 150 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 LBX1P52954 281 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 TMEM267Q0VDI3 215 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 KIF26BQ2KJY2 2108 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 RAET1LQ5VY80 246 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 OR5L2Q8NGL0 311 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 CCL4L1Q8NHW4 92 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 POC1BQ8TC44 478 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 PSMF1Q92530 271 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 CIB3Q96Q77 187 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 A0A1W2PP11 408 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 GREM1O60565 184 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 LMX1BO60663 402 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 PITX3O75364 302 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF205O95201 554 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 ASAH2BP0C7U1 165 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF154Q13106 437 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 Q6ZSR6 202 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 SRD5A3Q9H8P0 318 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 ENY2Q9NPA8 101 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 RNF186Q9NXI6 227 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 THAP10Q9P2Z0 257 aaPredicted RBP9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 HDGFL3Q9Y3E1 203 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 TNFRSF10CO14798 259 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 TOX4O94842 621 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 DEFB103AP81534 67 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 TMEM176BQ3YBM2 270 aaPredicted RBP9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF684Q5T5D7 378 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 VN1R17PQ8TDU5 208 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 LMX1AQ8TE12 382 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 PATE1Q8WXA2 126 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 DYRK2Q92630 601 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 SMOC1Q9H4F8 434 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 SLC17A4Q9Y2C5 497 aa9.96□□□□□ -0.81
CRNKL1-204ENST00000490910 C9JQL5 133 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 IGKV1D-16P01601 117 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 SELLP14151 372 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CRISP2P16562 243 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 RRADP55042 308 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 RAB31Q13636 194 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CEBPEQ15744 281 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 RAB40CQ96S21 281 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 TP53RKQ96S44 253 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CALHM2Q9HA72 323 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 NKX2-6A6NCS4 301 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 TRAPPC2LH3BP13 241 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CTXN2P0C2S0 81 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CT45A8P0DMV1 189 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CT45A9P0DMV2 189 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 TCN2P20062 427 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 HNRNPKP61978 463 aaKnown RBP eCLIP9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 RPS4XP62701 263 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 CT45A2Q5DJT8 189 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 BATF2Q8N1L9 274 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 BHLHE23Q8NDY6 225 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 OR5AU1Q8NGC0 362 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 ZNF596Q8TC21 504 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 FGF14Q92915 247 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 DEFB126Q9BYW3 111 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 MSL2Q9HCI7 577 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 P4HTMQ9NXG6 502 aa9.96□□□□□ -0.82
CRNKL1-204ENST00000490910 MMACHCQ9Y4U1 282 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms