RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 BMPERQ8N8U9 685 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 GPR137Q96N19 417 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 SUCNR1Q9BXA5 334 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 PPIAL4AQ9Y536 164 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 CEACAM3P40198 252 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 KCNJ3P48549 501 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 SPICQ8N5J4 248 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 WDR13Q9H1Z4 485 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 TANC1Q9C0D5 1861 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 NEURL1O76050 574 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 TPPPO94811 219 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 TGM6O95932 706 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 SSTR2P30874 369 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 PRRX1P54821 245 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 AMELYQ99218 206 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 PURGQ9UJV8 347 aaKnown RBP12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 B8ZZF3 427 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 GPR37O15354 613 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 LALBAP00709 142 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 AADACP22760 399 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
ARHGEF39-205ENST00000490638 TRAV8-7A0A075B6U6 113 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 OR8U8P0C7N1 319 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 SERPINF1P36955 418 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 UBAC2Q8NBM4 344 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 NBL1P41271 181 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 PDZK1IP1Q13113 114 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 PRSS33Q8NF86 280 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 PCDHGA9Q9Y5G4 932 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 A0A0B4J2A0 478 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 GPR31O00270 319 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 HAND1O96004 215 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 IGF2P01344 180 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 ZNF708P17019 499 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 TUBG1P23258 451 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 OR2V2Q96R30 315 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 SHPKQ9UHJ6 478 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 TICRRQ7Z2Z1 1910 aa12.53□□□□□ -0.4
ARHGEF39-205ENST00000490638 TSPAN4O14817 238 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 CTAG2O75638 210 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 AKR1D1P51857 326 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 ATP5J2P56134 94 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 VMA21Q3ZAQ7 101 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 POC1BQ8TC44 478 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 SLC35E1Q96K37 410 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 ZNF75AQ96N20 296 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 TBR1Q16650 682 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 ITLN1Q8WWA0 313 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 LHFPL6Q9Y693 200 aa12.52□□□□□ -0.4
ARHGEF39-205ENST00000490638 GZMHP20718 246 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 ASCL1P50553 236 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 TAS2R30P59541 319 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 SEMA5BQ9P283 1151 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 FLVCR2Q9UPI3 526 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 CDK2AP1O14519 115 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 ADH4P08319 380 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 NANOS3P60323 173 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 ASAH1Q13510 395 aa12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-205ENST00000490638 IGHV3OR15-7A0A075B7D8 119 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 TMEM229AB2RXF0 380 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 SEMG1P04279 462 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 CT45A6P0DMU7 189 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 CT45A5P0DMU8 189 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 CT45A7P0DMV0 189 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 RAB6AP20340 208 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 SSBP1Q04837 148 aaKnown RBP12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 Q3ZCU0 254 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
ARHGEF39-205ENST00000490638 KCNK15Q9H427 330 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms