RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PID1Q7Z2X4 250 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 LINC00596Q86U02 117 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 OR52K1Q8NGK4 314 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ACTL9Q8TC94 416 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 CIDECQ96AQ7 238 aaPredicted RBP1.81□□□□□ -2.12
CD46-216ENST00000490278 FXYD5Q96DB9 178 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 OTUB2Q96DC9 234 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ADTRPQ96IZ2 230 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 PKMYT1Q99640 499 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 SYT4Q9H2B2 425 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ACOT13Q9NPJ3 140 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 SDHAF2Q9NX18 166 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 VAPAQ9P0L0 249 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 TRAPPC1Q9Y5R8 145 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 COL5A1P20908 1838 aaPredicted RBP1.8□□□□□ -2.12
CD46-216ENST00000490278 E7EWF7 191 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 DEKP35659 375 aaKnown RBP1.8□□□□□ -2.12
CD46-216ENST00000490278 ZNF141Q15928 474 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 CEACAM16Q2WEN9 425 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 TTMPQ5BVD1 217 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 WDR59Q6PJI9 974 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 AMN1Q8IY45 258 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 GAPTQ8N292 157 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 SYS1Q8N2H4 156 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 ATPAF2Q8N5M1 289 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 OR6K2Q8NGY2 324 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 OR8S1Q8NH09 359 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 OR51Q1Q8NH59 317 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 DOK4Q8TEW6 326 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 CACNG8Q8WXS5 425 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 YPEL4Q96NS1 127 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 VAT1Q99536 393 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 BEX2Q9BXY8 128 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 DSN1Q9H410 356 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 NLE1Q9NVX2 485 aaPredicted RBP1.8□□□□□ -2.12
CD46-216ENST00000490278 TNIKQ9UKE5 1360 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 SSH2Q76I76 1423 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 ZSWIM8A7E2V4 1837 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 TMEM131Q92545 1883 aa1.8□□□□□ -2.12
CD46-216ENST00000490278 K7ERS5 55 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 VAPBO95292 243 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 PRPS1L1P21108 318 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 BGNP21810 368 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 FOXA1P55317 472 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 ATP5J2P56134 94 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 CAVIN4Q5BKX8 364 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 UBE2NLQ5JXB2 153 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 RESP18Q5W5W9 173 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 ZNF773Q6PK81 442 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 COMTD1Q86VU5 262 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 CYP4Z1Q86W10 505 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 CPNE9Q8IYJ1 553 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 OR2K2Q8NGT1 345 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 STMN3Q9NZ72 180 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 DNAJC27Q9NZQ0 273 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 ZNF706Q9Y5V0 76 aaPredicted RBP1.79□□□□□ -2.12
CD46-216ENST00000490278 ICOSQ9Y6W8 199 aa1.79□□□□□ -2.12
CD46-216ENST00000490278 IGHV3-21A0A0B4J1V1 117 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 CD300LBA8K4G0 201 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 LEUTXA8MZ59 168 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 ISLRO14498 428 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 GYG2O15488 501 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 SC5DO75845 299 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 CPSF4O95639 269 aaKnown RBP1.78□□□□□ -2.12
CD46-216ENST00000490278 CD8AP01732 235 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 IGHMP01871 453 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 MLNP12872 115 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 CCL23P55773 120 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 CARD18P57730 90 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 DSTNP60981 165 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 BNIP2Q12982 314 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 VAMP3Q15836 100 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 TMEM241Q24JQ0 296 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 Q499Y3 187 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 FAHD1Q6P587 224 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 RPRMLQ8N4K4 120 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 LY6G5BQ8NDX9 201 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 C2orf15Q8WU43 125 aaKnown RBP1.78□□□□□ -2.12
CD46-216ENST00000490278 CDKL2Q92772 493 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 IGF2BP2-AS1Q96M15 143 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 NXF2Q9GZY0 626 aaKnown RBP1.78□□□□□ -2.12
CD46-216ENST00000490278 TXNIPQ9H3M7 391 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 MCTS1Q9ULC4 181 aaKnown RBP1.78□□□□□ -2.12
CD46-216ENST00000490278 SLC22A14Q9Y267 594 aa1.78□□□□□ -2.12
CD46-216ENST00000490278 PRR14LQ5THK1 2151 aa1.78□□□□□ -2.13
CD46-216ENST00000490278 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
CD46-216ENST00000490278 NACADO15069 1562 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 NOS1P29475 1434 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 SPATA31E1Q6ZUB1 1445 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 IGHV3-43A0A0B4J1X8 118 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 ZNF729A6NN14 1252 aaPredicted RBP1.77□□□□□ -2.13
CD46-216ENST00000490278 AQP9O43315 295 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 SYNGR2O43760 224 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 ENSAO43768 121 aaKnown RBP1.77□□□□□ -2.13
CD46-216ENST00000490278 TRGV3P03979 118 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 IL12BP29460 328 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms