RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 RAG2P55895 527 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 LGALS4P56470 323 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 ERVFRD-1P60508 538 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 RCN1Q15293 331 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF691Q5VV52 312 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 GDPGP1Q6ZNW5 385 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 SETD9Q8NE22 299 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 PPP1R35Q8TAP8 253 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 TSEN15Q8WW01 171 aaKnown RBP14.57□□□□□ -0.08
ABCF3-217ENST00000489719 RFT1Q96AA3 541 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 PDCD1LG2Q9BQ51 273 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 RBFOX1Q9NWB1 397 aaKnown RBP14.57□□□□□ -0.08
ABCF3-217ENST00000489719 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
ABCF3-217ENST00000489719 ZNRD1Q9P1U0 126 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 PCDHGB5Q9Y5G0 923 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 MMP24Q9Y5R2 645 aa14.57□□□□□ -0.08
ABCF3-217ENST00000489719 SH2D1BO14796 132 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF737O75373 536 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 ALX3O95076 343 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 NDUFA7O95182 113 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 CLIC3O95833 236 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 HCKP08631 526 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 LIMS3P0CW19 117 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 LIMS4P0CW20 117 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 CALCBP10092 127 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 HCP5Q6MZN7 132 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 OR8H2Q8N162 312 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 CNIH3Q8TBE1 160 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 SPACA5Q96QH8 159 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 SLITRK2Q9H156 845 aa14.56□□□□□ -0.08
ABCF3-217ENST00000489719 hADV38S2A0JD32 116 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 TMEM82A0PJX8 343 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 MAGEB3O15480 346 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF728P0DKX0 622 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 TMEM225BP0DP42 221 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 MYL12AP19105 171 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 GTF2A1P52655 376 aaPredicted RBP14.55□□□□□ -0.08
ABCF3-217ENST00000489719 SNU13P55769 128 aaKnown RBP14.55□□□□□ -0.08
ABCF3-217ENST00000489719 MEF2CQ06413 473 aaPredicted RBP14.55□□□□□ -0.08
ABCF3-217ENST00000489719 MED21Q13503 144 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 EDDM3AQ14507 147 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF273Q14593 569 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF146Q15072 292 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 GRK1Q15835 563 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 CCDC58Q4VC31 144 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 SPIN3Q5JUX0 258 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 RPL22L1Q6P5R6 122 aaKnown RBP14.55□□□□□ -0.08
ABCF3-217ENST00000489719 C11orf42Q8N5U0 333 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 PARP16Q8N5Y8 322 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 BEND2Q8NDZ0 799 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 OR5R1Q8NH85 324 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 JAM3Q9BX67 310 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 HMG20AQ9NP66 347 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 GSTK1Q9Y2Q3 226 aa14.55□□□□□ -0.08
ABCF3-217ENST00000489719 CLPSL1A2RUU4 121 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 C17orf98A8MV24 154 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 SULT1B1O43704 296 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 COX7A1P24310 79 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 ETV1P50549 477 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 IL18R1Q13478 541 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 TAF9Q16594 264 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 OLFML2AQ68BL7 652 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 C17orf107Q6ZR85 190 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 SAXO1Q8IYX7 474 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 OR5D18Q8NGL1 313 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 OR13D1Q8NGV5 346 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 TMEM80Q96HE8 168 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 CHST6Q9GZX3 395 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 RHOFQ9HBH0 211 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 EXOSC4Q9NPD3 245 aaKnown RBP14.54□□□□□ -0.08
ABCF3-217ENST00000489719 BABAM2Q9NXR7 383 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 IL36RNQ9UBH0 155 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 VPREB3Q9UKI3 123 aa14.54□□□□□ -0.08
ABCF3-217ENST00000489719 EXOSC1Q9Y3B2 195 aaKnown RBP14.54□□□□□ -0.08
ABCF3-217ENST00000489719 MGST3O14880 152 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 KDM4BO94953 1096 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 CD2P06729 351 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 RAB3AP20336 220 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 SOX2P48431 317 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 ADARB1P78563 741 aaKnown RBP14.53□□□□□ -0.08
ABCF3-217ENST00000489719 RELBQ01201 579 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 SCN1BQ07699 218 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 KISS1Q15726 138 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 DHRS7BQ6IAN0 325 aaPredicted RBP14.53□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF782Q6ZMW2 699 aaPredicted RBP14.53□□□□□ -0.08
ABCF3-217ENST00000489719 SATL1Q86VE3 508 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 OR52N4Q8NGI2 321 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 GPR148Q8TDV2 347 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 CPNE2Q96FN4 548 aaPredicted RBP14.53□□□□□ -0.08
ABCF3-217ENST00000489719 ZNF714Q96N38 554 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 SSX3Q99909 188 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 MEGF9Q9H1U4 602 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 DIMT1Q9UNQ2 313 aaKnown RBP14.53□□□□□ -0.08
ABCF3-217ENST00000489719 HSPE1-MOB4S4R3N1 261 aa14.53□□□□□ -0.08
ABCF3-217ENST00000489719 IGKV1-12A0A0C4DH73 117 aa14.52□□□□□ -0.09
ABCF3-217ENST00000489719 MEX3AA1L020 520 aaKnown RBP14.52□□□□□ -0.09
ABCF3-217ENST00000489719 FUOMA2VDF0 154 aa14.52□□□□□ -0.09
ABCF3-217ENST00000489719 SIRPB1O00241 398 aa14.52□□□□□ -0.09
ABCF3-217ENST00000489719 PSPNO60542 156 aa14.52□□□□□ -0.09
ABCF3-217ENST00000489719 IGKV1D-12P01611 117 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms